RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 COG7P83436 770 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 SEMG2Q02383 582 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 CEBPZQ03701 1054 aaKnown RBP7.59□□□□□ -1.19
ATXN3-219ENST00000553488 TLE3Q04726 772 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 ZBTB16Q05516 673 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 EFEMP1Q12805 493 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 SLC39A14Q15043 492 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 E2F5Q15329 346 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 C1orf220Q5T0J3 134 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 SFMBT2Q5VUG0 894 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 UNC13DQ70J99 1090 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 BHLHA9Q7RTU4 235 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 TADA2BQ86TJ2 420 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 ADIPOR2Q86V24 386 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 ERICH1Q86X53 443 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 GATAD2AQ86YP4 633 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 DENND1CQ8IV53 801 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 ENGASEQ8NFI3 743 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 CYB5D2Q8WUJ1 264 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 TMEM174Q8WUU8 243 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 CNDP2Q96KP4 475 aaKnown RBP7.59□□□□□ -1.19
ATXN3-219ENST00000553488 SLC6A18Q96N87 628 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 ELF4Q99607 663 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-219ENST00000553488 TRIM56Q9BRZ2 755 aaKnown RBP7.59□□□□□ -1.19
ATXN3-219ENST00000553488 BACH2Q9BYV9 841 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 DCLK3Q9C098 648 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 BTBD1Q9H0C5 482 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 FBRSQ9HAH7 460 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 EBF2Q9HAK2 575 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 SGK2Q9HBY8 427 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 APOBEC3GQ9HC16 384 aaKnown RBP7.59□□□□□ -1.19
ATXN3-219ENST00000553488 DMAC2Q9NW81 257 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 PPP4R2Q9NY27 417 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 CGNQ9P2M7 1197 aaKnown RBP7.59□□□□□ -1.19
ATXN3-219ENST00000553488 SERGEFQ9UGK8 458 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-219ENST00000553488 AHCTF1Q8WYP5 2266 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 RELNP78509 3460 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 A0A1W2PPC4 97 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 A0A1W2PR77 199 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 TIMM44O43615 452 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 STX6O43752 255 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 DFNA5O60443 496 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 BRINP1O60477 761 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 EIF4EBP3O60516 100 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-219ENST00000553488 EXOC3O60645 756 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 CYBBP04839 570 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 C1SP09871 688 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 RALAP11233 206 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 P4HA1P13674 534 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 MAPK1P28482 360 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 CASP1P29466 404 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 NASPP49321 788 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-219ENST00000553488 SGSHP51688 502 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 RACK1P63244 317 aaKnown RBP7.58□□□□□ -1.2
ATXN3-219ENST00000553488 TARDBPQ13148 414 aaKnown RBP eCLIP7.58□□□□□ -1.2
ATXN3-219ENST00000553488 CUL4AQ13619 759 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 KCNJ12Q14500 433 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 KNOP1Q1ED39 458 aaKnown RBP7.58□□□□□ -1.2
ATXN3-219ENST00000553488 SGSM1Q2NKQ1 1148 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 TTC31Q49AM3 519 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-219ENST00000553488 FNDC3BQ53EP0 1204 aaKnown RBP7.58□□□□□ -1.2
ATXN3-219ENST00000553488 RAB41Q5JT25 222 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 PRAMEF14Q5SWL7 426 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 KIAA0895LQ68EN5 471 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 USP30Q70CQ3 517 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 KANSL1Q7Z3B3 1105 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 GPR155Q7Z3F1 870 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 ZNF605Q86T29 641 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 SPACA3Q8IXA5 215 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 WFDC5Q8TCV5 224 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 WFIKKN2Q8TEU8 576 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 DDI1Q8WTU0 396 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 RFFLQ8WZ73 363 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 TAF4BQ92750 862 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 CYFIP2Q96F07 1278 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 CDK5RAP1Q96SZ6 601 aaKnown RBP7.58□□□□□ -1.2
ATXN3-219ENST00000553488 C7orf25Q9BPX7 421 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 DUSP16Q9BY84 665 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 ACE2Q9BYF1 805 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-219ENST00000553488 LRRC27Q9C0I9 530 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 RSPH9Q9H1X1 276 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-219ENST00000553488 CUEDC2Q9H467 287 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 MARCH2Q9P0N8 246 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 STOML2Q9UJZ1 356 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 RP1P56715 2156 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 LRRK2Q5S007 2527 aa7.58□□□□□ -1.2
ATXN3-219ENST00000553488 SPENQ96T58 3664 aaKnown RBP7.58□□□□□ -1.2
ATXN3-219ENST00000553488 TMEM238LA0A1B0GVL6 79 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 SLC12A8A0AV02 714 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 J3QKU1 62 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 WNT9AO14904 365 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 YKT6O15498 198 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 RRP8O43159 456 aaKnown RBP7.57□□□□□ -1.2
ATXN3-219ENST00000553488 CLSTN1O94985 981 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 LDOC1O95751 146 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-219ENST00000553488 HLA-DRAP01903 254 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 DNTTP04053 509 aa7.57□□□□□ -1.2
ATXN3-219ENST00000553488 RPN1P04843 607 aaKnown RBP7.57□□□□□ -1.2
ATXN3-219ENST00000553488 CTSBP07858 339 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms