RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 A0A1W2PPC4 97 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 ILVBLA1L0T0 632 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 FAM47DPA6NHR8 397 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 SIGLEC16A6NMB1 481 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 C1QTNF3-AMACRE9PGA6 284 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 MCF2LO15068 1137 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 TEX33O43247 280 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 IGHV4-34P06331 123 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 ZNF883P0CG24 379 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 SRCP12931 536 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 RFC1P35251 1148 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-207ENST00000553290 ADRA1BP35368 520 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 CSNK1EP49674 416 aaKnown RBP13.28□□□□□ -0.28
ACTN1-207ENST00000553290 CCR5P51681 352 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
ACTN1-207ENST00000553290 C15orf59Q2T9L4 293 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-207ENST00000553290 PPP1R2P3Q6NXS1 205 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 NCEH1Q6PIU2 408 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 MON1BQ7L1V2 547 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 PHLDB2Q86SQ0 1253 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 AADATQ8N5Z0 425 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 ATP11CQ8NB49 1132 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 OR14C36Q8NHC7 312 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 FAM172AQ8WUF8 416 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 CENPIQ92674 756 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-207ENST00000553290 CCDC114Q96M63 670 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 OSBPL2Q9H1P3 480 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 KDM4CQ9H3R0 1056 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 GAREM1Q9H706 876 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 TM9SF3Q9HD45 589 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 OR12D3Q9UGF7 316 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 VPS51Q9UID3 782 aa13.28□□□□□ -0.28
ACTN1-207ENST00000553290 A0A0D9SEW6 157 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 A0A1B0GVT2 93 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 ANKRD62A6NC57 917 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 SLC7A4O43246 635 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 SNAP91O60641 907 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 GJB6O95452 261 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 GPD1P21695 349 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 CLCN6P51797 869 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 ADPRHP54922 357 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 RACK1P63244 317 aaKnown RBP13.27□□□□□ -0.29
ACTN1-207ENST00000553290 BNC1Q01954 994 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 SLC20A2Q08357 652 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 HLA-BQ31612 363 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 ARTNQ5T4W7 220 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 ACAD10Q6JQN1 1059 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 RETSATQ6NUM9 610 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 WDR59Q6PJI9 974 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 Q6ZVU0 165 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 IRF2BP2Q7Z5L9 587 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 ADAT2Q7Z6V5 191 aaKnown RBP13.27□□□□□ -0.29
ACTN1-207ENST00000553290 FAM131CQ96AQ9 280 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 CNTNAP3BQ96NU0 1288 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 ORAI3Q9BRQ5 295 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 CNTNAP3Q9BZ76 1288 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 ZNF212Q9UDV6 495 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 PPM1HQ9ULR3 514 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 ANKRD6Q9Y2G4 727 aa13.27□□□□□ -0.29
ACTN1-207ENST00000553290 TBC1D3DA0A087WVF3 549 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 TBC1D3IA0A087WXS9 549 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 TBC1D3EA0A087X179 549 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 TBC1D3KA0A087X1G2 549 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 A0A1B0GTH6 734 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 A0A1W2PQC6 194 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 TBC1D3FA6NER0 549 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-207ENST00000553290 C10orf142B7Z368 130 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 TBC1D3LB9A6J9 549 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 MT-CO1P00395 513 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 TBC1D3HP0C7X1 549 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 TPRP12270 2363 aaKnown RBP13.26□□□□□ -0.29
ACTN1-207ENST00000553290 DESP17661 470 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 TNFAIP3P21580 790 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 DRD3P35462 400 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 ETFBP38117 255 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 HDAC4P56524 1084 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 GNA12Q03113 381 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 CCDC15Q0P6D6 951 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 KLHL40Q2TBA0 621 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 RAB6CQ53S08 254 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 MANEALQ5VSG8 457 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 TBC1D3GQ6DHY5 549 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 TBC1D3CQ6IPX1 549 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 DNAJC24Q6P3W2 148 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-207ENST00000553290 NAXDQ8IW45 347 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 MCOLN2Q8IZK6 566 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 TBC1D3Q8IZP1 549 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-207ENST00000553290 PIP4K2CQ8TBX8 421 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 BAP1Q92560 729 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 NTAN1Q96AB6 310 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 SKA1Q96BD8 255 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 VCPIP1Q96JH7 1222 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 FUCA2Q9BTY2 467 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 RAB6CQ9H0N0 254 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 ATP13A1Q9HD20 1204 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 TM7SF3Q9NS93 570 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 SARDHQ9UL12 918 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 PCDHB9Q9Y5E1 797 aa13.26□□□□□ -0.29
ACTN1-207ENST00000553290 PCDHGB2Q9Y5G2 931 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms