RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 K7ERQ8 282 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 SMAD6O43541 496 aaKnown RBP19.76■□□□□ 0.75
PTCH1-227ENST00000553256 SERPING1P05155 500 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 OR1E1P30953 314 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 CASP14P31944 242 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 DPP6P42658 865 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 METAP1P53582 386 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 ARF5P84085 180 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 ELAVL3Q14576 367 aaKnown RBP19.76■□□□□ 0.75
PTCH1-227ENST00000553256 CST6Q15828 149 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 ASTE1Q2TB18 679 aaPredicted RBP19.76■□□□□ 0.75
PTCH1-227ENST00000553256 SLFN11Q7Z7L1 901 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 AADATQ8N5Z0 425 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 PEBP4Q96S96 227 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 RTKNQ9BST9 563 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 C6orf106Q9H6K1 298 aaPredicted RBP19.76■□□□□ 0.75
PTCH1-227ENST00000553256 SARDHQ9UL12 918 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 SCML1Q9UN30 329 aa19.76■□□□□ 0.75
PTCH1-227ENST00000553256 CNOT1A5YKK6 2376 aaKnown RBP19.76■□□□□ 0.75
PTCH1-227ENST00000553256 A0A087X0T9 212 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 WASH4PA8MWX3 477 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 RNF103O00237 685 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 KHNYNO15037 678 aaKnown RBP19.75■□□□□ 0.75
PTCH1-227ENST00000553256 MID1O15344 667 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 FAM228BP0C875 321 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 DRD3P35462 400 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 MAPKAPK2P49137 400 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 AIF1P55008 147 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 GNA12Q03113 381 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 DLG2Q15700 870 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 STPG1Q5TH74 334 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 TMC6Q7Z403 805 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 MMAAQ8IVH4 418 aaKnown RBP19.75■□□□□ 0.75
PTCH1-227ENST00000553256 CPLX3Q8WVH0 158 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 FOXJ1Q92949 421 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 DNAJC7Q99615 494 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 CNOT8Q9UFF9 292 aaKnown RBP19.75■□□□□ 0.75
PTCH1-227ENST00000553256 PPM1HQ9ULR3 514 aa19.75■□□□□ 0.75
PTCH1-227ENST00000553256 LUC7L2Q9Y383 392 aaKnown RBP19.75■□□□□ 0.75
PTCH1-227ENST00000553256 MCF2LO15068 1137 aa19.74■□□□□ 0.75
PTCH1-227ENST00000553256 DNTTP04053 509 aa19.74■□□□□ 0.75
PTCH1-227ENST00000553256 CTSLP07711 333 aa19.74■□□□□ 0.75
PTCH1-227ENST00000553256 ACADMP11310 421 aa19.74■□□□□ 0.75
PTCH1-227ENST00000553256 SDHBP21912 280 aa19.74■□□□□ 0.75
PTCH1-227ENST00000553256 ACVRL1P37023 503 aa19.74■□□□□ 0.75
PTCH1-227ENST00000553256 AASDHQ4L235 1098 aaPredicted RBP19.74■□□□□ 0.75
PTCH1-227ENST00000553256 TRIM61Q5EBN2 209 aa19.74■□□□□ 0.75
PTCH1-227ENST00000553256 DCUN1D2Q6PH85 259 aa19.74■□□□□ 0.75
PTCH1-227ENST00000553256 VSTM4Q8IW00 320 aa19.74■□□□□ 0.75
PTCH1-227ENST00000553256 DRC7Q8IY82 874 aa19.74■□□□□ 0.75
PTCH1-227ENST00000553256 C12orf50Q8NA57 414 aaPredicted RBP19.74■□□□□ 0.75
PTCH1-227ENST00000553256 OR2A12Q8NGT7 310 aa19.74■□□□□ 0.75
PTCH1-227ENST00000553256 ARHGEF2Q92974 986 aaKnown RBP19.74■□□□□ 0.75
PTCH1-227ENST00000553256 TBC1D31Q96DN5 1066 aa19.74■□□□□ 0.75
PTCH1-227ENST00000553256 C2orf49Q9BVC5 232 aaPredicted RBP19.74■□□□□ 0.75
PTCH1-227ENST00000553256 MUC3BQ9H195 1237 aa19.74■□□□□ 0.75
PTCH1-227ENST00000553256 ALOX15BO15296 676 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 NDUFS2O75306 463 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 IGHV4-34P06331 123 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 SERPINF2P08697 491 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 MYBL1P10243 752 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 MAOBP27338 520 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 SLC8A1P32418 973 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 CLCN6P51797 869 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 BNC1Q01954 994 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 CA9Q16790 459 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 DUOXA1Q1HG43 343 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 DCAF12L1Q5VU92 463 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 Q6ZVU0 165 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 ERMP1Q7Z2K6 904 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 FAM124AQ86V42 546 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 EDEM2Q9BV94 578 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 KLC2Q9H0B6 622 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 NEUROG2Q9H2A3 272 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 SGK2Q9HBY8 427 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 SLC25A13Q9UJS0 675 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 CDV3Q9UKY7 258 aaKnown RBP19.73■□□□□ 0.75
PTCH1-227ENST00000553256 FZD4Q9ULV1 537 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.73■□□□□ 0.75
PTCH1-227ENST00000553256 ACTL7AQ9Y615 435 aa19.73■□□□□ 0.75
PTCH1-227ENST00000553256 A0A1W2PP55 124 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 LRCH4O75427 683 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 SEMA4FO95754 770 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 CYP1A2P05177 515 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 C5AR1P21730 350 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 PSMA2P25787 234 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 KRT83P78385 493 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 SPECC1LQ69YQ0 1117 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 LINGO4Q6UY18 593 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 RTL3Q8N8U3 475 aaKnown RBP19.72■□□□□ 0.75
PTCH1-227ENST00000553256 RNF214Q8ND24 703 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 CEP76Q8TAP6 659 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 ZNF653Q96CK0 615 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 BTBD1Q9H0C5 482 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 THAP2Q9H0W7 228 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 EBF2Q9HAK2 575 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 OSGEPQ9NPF4 335 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 FSCN3Q9NQT6 498 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 FBXL12Q9NXK8 326 aa19.72■□□□□ 0.75
PTCH1-227ENST00000553256 SLC6A14Q9UN76 642 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms