RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PRR19A6NJB7 356 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 EFCAB7A8K855 629 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 ZNF891A8MT65 544 aaPredicted RBP5.37□□□□□ -1.55
CKAP4-203ENST00000553039 E9PMD0 336 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 H3BM21 787 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 TPP1O14773 563 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 LATO43561 262 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 FAM189A1O60320 539 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 SEMA7AO75326 666 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 TACC1O75410 805 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 PIAS2O75928 621 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 F13A1P00488 732 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 ITGB3P05106 788 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 RALAP11233 206 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 C5AR1P21730 350 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 WARSP23381 471 aaKnown RBP5.37□□□□□ -1.55
CKAP4-203ENST00000553039 RPS6KB1P23443 525 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 PSMC1P62191 440 aaKnown RBP5.37□□□□□ -1.55
CKAP4-203ENST00000553039 MC1RQ01726 317 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 NUMA1Q14980 2115 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 NR0B2Q15466 257 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 CDKN3Q16667 212 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 LONRF2Q1L5Z9 754 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 MPPE1Q53F39 396 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 SETMARQ53H47 684 aaPredicted RBP5.37□□□□□ -1.55
CKAP4-203ENST00000553039 MDH1BQ5I0G3 518 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 EARS2Q5JPH6 523 aaKnown RBP5.37□□□□□ -1.55
CKAP4-203ENST00000553039 FYB2Q5VWT5 728 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 SV2AQ7L0J3 742 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 MYCT1Q8N699 235 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 ZNF557Q8N988 423 aaPredicted RBP5.37□□□□□ -1.55
CKAP4-203ENST00000553039 WBP2Q969T9 261 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 TMA16Q96EY4 203 aaKnown RBP5.37□□□□□ -1.55
CKAP4-203ENST00000553039 HPDLQ96IR7 371 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 CMKLR1Q99788 373 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 EFHD1Q9BUP0 239 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 EPB41L5Q9HCM4 733 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 CASS4Q9NQ75 786 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 UCKL1Q9NWZ5 548 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 MED13Q9UHV7 2174 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 SVILO95425 2214 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 KIAA1549LQ6ZVL6 1849 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 SPG11Q96JI7 2443 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 MTORP42345 2549 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 FAM92AA1XBS5 289 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 HEATR9A2RTY3 570 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 MKRN2OSH3BPM6 223 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 RTN2O75298 545 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 CNTN5O94779 1100 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 TBX18O95935 607 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 MSX1P28360 303 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 COPB1P53618 953 aaKnown RBP5.36□□□□□ -1.55
CKAP4-203ENST00000553039 TBX4P57082 545 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 ZNF445P59923 1031 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 MAPK7Q13164 816 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 TRIM29Q14134 588 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 FGL2Q14314 439 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 CST6Q15828 149 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 ARSJQ5FYB0 599 aaPredicted RBP5.36□□□□□ -1.55
CKAP4-203ENST00000553039 C10orf120Q5SQS8 335 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 MBLAC2Q68D91 279 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 SCARA3Q6AZY7 606 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 TCTN3Q6NUS6 607 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 ESRP1Q6NXG1 681 aaKnown RBP5.36□□□□□ -1.55
CKAP4-203ENST00000553039 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.36□□□□□ -1.55
CKAP4-203ENST00000553039 Q6ZNB5 142 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 CHST9Q7L1S5 443 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 RSRC2Q7L4I2 434 aaKnown RBP5.36□□□□□ -1.55
CKAP4-203ENST00000553039 LIMS2Q7Z4I7 341 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 VASH2Q86V25 355 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 NLRP8Q86W28 1048 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 ZFAND4Q86XD8 727 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 DTX1Q86Y01 620 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 MMAAQ8IVH4 418 aaKnown RBP5.36□□□□□ -1.55
CKAP4-203ENST00000553039 AHI1Q8N157 1196 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 CPXM2Q8N436 756 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 ZNF276Q8N554 614 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 IL22RA1Q8N6P7 574 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 SYT2Q8N9I0 419 aaPredicted RBP5.36□□□□□ -1.55
CKAP4-203ENST00000553039 KDM1BQ8NB78 822 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 SCAMP5Q8TAC9 235 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 CPT1CQ8TCG5 803 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 CYB5D2Q8WUJ1 264 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 HTR3CQ8WXA8 447 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 NANOS1Q8WY41 292 aaKnown RBP5.36□□□□□ -1.55
CKAP4-203ENST00000553039 POMGNT1Q8WZA1 660 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 FERD3LQ96RJ6 166 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 KCNK16Q96T55 309 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 INSM2Q96T92 566 aaPredicted RBP5.36□□□□□ -1.55
CKAP4-203ENST00000553039 MED10Q9BTT4 135 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 RUSC1Q9BVN2 902 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 INTS2Q9H0H0 1204 aaKnown RBP5.36□□□□□ -1.55
CKAP4-203ENST00000553039 CDH19Q9H159 772 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 TMEM60Q9H2L4 133 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 PREBQ9HCU5 417 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 ST7Q9NRC1 585 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 SEL1LQ9UBV2 794 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 PISDQ9UG56 409 aa5.36□□□□□ -1.55
CKAP4-203ENST00000553039 IPO11Q9UI26 975 aaKnown RBP5.36□□□□□ -1.55
CKAP4-203ENST00000553039 G3BP2Q9UN86 482 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms