RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 OTOGLQ3ZCN5 2332 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 HELZ2Q9BYK8 2649 aaKnown RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 GPR75-ASB3A0A0A6YYF3 556 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 A0A1W2PRG0 241 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 EFCAB8A8MWE9 144 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 H3BNC9 293 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 ZSCAN9O15535 394 aaPredicted RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 GFPT2O94808 682 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 GJB5O95377 273 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 ITGB1P05556 798 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 ATXN1LP0C7T5 689 aaKnown RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 MYCLP12524 364 aaPredicted RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 GNAT2P19087 354 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 CSF2RBP32927 897 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 VIPR2P41587 438 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 PXNP49023 591 aaPredicted RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 PRKAA2P54646 552 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 ARF3P61204 181 aaPredicted RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 ARF1P84077 181 aaKnown RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 ZNF844Q08AG5 666 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 FHL2Q14192 279 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 KRT32Q14532 448 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 COG2Q14746 738 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 UBXN2BQ14CS0 331 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 CCNG2Q16589 344 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 TMTC4Q5T4D3 741 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 CFAP58Q5T655 872 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 MFSD4BQ5TF39 518 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 SPATA1Q5VX52 437 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 RAP1GAP2Q684P5 730 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 EFCAB12Q6NXP0 572 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 NFRKBQ6P4R8 1299 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 TMCO3Q6UWJ1 677 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 TAX1BP1Q86VP1 789 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 MAPKAPK5Q8IW41 473 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 RRP36Q96EU6 259 aaKnown RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 ZNF668Q96K58 619 aaPredicted RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 EIF3CQ99613 913 aaKnown RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 TCF25Q9BQ70 676 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 SPATA5L1Q9BVQ7 753 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 GPR63Q9BZJ6 419 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 KATNBL1Q9H079 304 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 UPF3AQ9H1J1 476 aaKnown RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 ALDH8A1Q9H2A2 487 aaPredicted RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 PABPC3Q9H361 631 aaKnown RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 UNKLQ9H9P5 680 aaKnown RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 HOXC10Q9NYD6 342 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 NDUFAF4Q9P032 175 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 ORC3Q9UBD5 711 aaPredicted RBP4.12□□□□□ -1.75
LIMA1-208ENST00000551691 PI4KBQ9UBF8 816 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 SLC23A1Q9UHI7 598 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 CDH22Q9UJ99 828 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 SLC45A2Q9UMX9 530 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 TBC1D30Q9Y2I9 924 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 TTLL3Q9Y4R7 772 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 MYH2Q9UKX2 1941 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 MROH5Q6ZUA9 1318 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 ITPR1Q14643 2758 aa4.12□□□□□ -1.75
LIMA1-208ENST00000551691 CEP295Q9C0D2 2601 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 MYH13Q9UKX3 1938 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 AKAP13Q12802 2813 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 PNMA6EA0A0J9YXQ4 647 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 A0A1B0GUL7 405 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 UBE2QL1A1L167 161 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 A6NCN8 305 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 B4DLN1 442 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 H0Y3Z8 333 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 SRGAP2O75044 1071 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 RTN3O95197 1032 aaPredicted RBP4.11□□□□□ -1.75
LIMA1-208ENST00000551691 TK1P04183 234 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 ZNF853P0CG23 659 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 MGAT1P26572 445 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 LRPAP1P30533 357 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 ADORA1P30542 326 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 PRKAR1BP31321 381 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 ICAM3P32942 547 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 PAFAH1B1P43034 410 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 NDUFV1P49821 464 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 ADCY7P51828 1080 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 MECOMQ03112 1051 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 EFR3AQ14156 821 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 CSHL1Q14406 222 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 KCNAB1Q14722 419 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 GPR68Q15743 365 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 TRIM71Q2Q1W2 868 aaKnown RBP4.11□□□□□ -1.75
LIMA1-208ENST00000551691 BTBD16Q32M84 506 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 PREPLQ4J6C6 727 aaPredicted RBP4.11□□□□□ -1.75
LIMA1-208ENST00000551691 USP39Q53GS9 565 aaKnown RBP4.11□□□□□ -1.75
LIMA1-208ENST00000551691 HAUS3Q68CZ6 603 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 ZDHHC24Q6UX98 284 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 ADGRD2Q7Z7M1 963 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 RBM23Q86U06 439 aaKnown RBP4.11□□□□□ -1.75
LIMA1-208ENST00000551691 DZIP1Q86YF9 867 aaKnown RBP4.11□□□□□ -1.75
LIMA1-208ENST00000551691 TEX11Q8IYF3 940 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 ABRAQ8N0Z2 381 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 GPATCH11Q8N954 259 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 PDPRQ8NCN5 879 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 TMIEQ8NEW7 156 aa4.11□□□□□ -1.75
LIMA1-208ENST00000551691 LINS1Q8NG48 757 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms