RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, human

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2B1-208	ENST00000551009	COG5	Q9UP83	839 aa		5.09	□□□□□ -1.59
ATP2B1-208	ENST00000551009	CNTN6	Q9UQ52	1028 aa		5.09	□□□□□ -1.59
ATP2B1-208	ENST00000551009	TMEM98	Q9Y2Y6	226 aa		5.09	□□□□□ -1.59
ATP2B1-208	ENST00000551009	TBC1D3D	A0A087WVF3	549 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TBC1D3I	A0A087WXS9	549 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TBC1D3E	A0A087X179	549 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TBC1D3K	A0A087X1G2	549 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TBC1D3B	A6NDS4	549 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	FAM90A18P	A6NE21	464 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TBC1D3F	A6NER0	549 aa	Predicted RBP	5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	FAM90A16P	A6NEW6	464 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	MBD3L5	A6NJ08	208 aa	Predicted RBP	5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	FAM90A9P	A6NNJ1	464 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	FAM90A5P	A8MXJ8	464 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	KCNJ18	B7U540	433 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TBC1D3L	B9A6J9	549 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	SPTLC2	O15270	562 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	ASNA1	O43681	348 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	DHX16	O60231	1041 aa	Known RBP	5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	SYF2	O95926	243 aa	Known RBP	5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	ALDOC	P09972	364 aa	Known RBP	5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	FAM90A15P	P0C7V4	464 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	FAM90A14P	P0C7W9	464 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TBC1D3H	P0C7X1	549 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	CAPN3	P20807	821 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	CLNS1A	P54105	237 aa	Known RBP	5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	ADPRH	P54922	357 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	NAP1L1	P55209	391 aa	Known RBP	5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	SHC2	P98077	582 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	MPP1	Q00013	466 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	ICA1	Q05084	483 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	BLMH	Q13867	455 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	CCDC38	Q502W7	563 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	C6orf10	Q5SRN2	563 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	C10orf76	Q5T2E6	689 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	UBAP2	Q5T6F2	1119 aa	Known RBP	5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TBC1D3G	Q6DHY5	549 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TBC1D3C	Q6IPX1	549 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	RFX8	Q6ZV50	586 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	DDIAS	Q8IXT1	998 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TBC1D3	Q8IZP1	549 aa	Predicted RBP	5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	CHCHD4	Q8N4Q1	142 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	LTV1	Q96GA3	475 aa	Predicted RBP	5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	SLC26A6	Q9BXS9	759 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	OBP2B	Q9NPH6	170 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	SMC4	Q9NTJ3	1288 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	BLOC1S4	Q9NUP1	217 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	LIN7C	Q9NUP9	197 aa	Known RBP	5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	CDC23	Q9UJX2	597 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	UTS2R	Q9UKP6	389 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	ACAD8	Q9UKU7	415 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TRPC5	Q9UL62	973 aa	Predicted RBP	5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	SLC8A2	Q9UPR5	921 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TNFSF13B	Q9Y275	285 aa		5.08	□□□□□ -1.6
ATP2B1-208	ENST00000551009		A0A087WV62	115 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TMEM272	A0A1B0GTI8	110 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	ANKRD18B	A2A2Z9	1011 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	GAGE12J	A6NER3	117 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	AQP12B	A6NM10	295 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	SLC38A8	A6NNN8	435 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	KIF28P	B7ZC32	967 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	SKAP2	O75563	359 aa	Predicted RBP	5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	NFATC1	O95644	943 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	DDX58	O95786	925 aa	Known RBP	5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	IFNA2	P01563	188 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	PYGL	P06737	847 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	ITGA2B	P08514	1039 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	AKT1	P31749	480 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	ELF1	P32519	619 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	CIITA	P33076	1130 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	POLD2	P49005	469 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	SF3A3	Q12874	501 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	PFKFB4	Q16877	469 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	ZACN	Q401N2	412 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	CYB5R4	Q7L1T6	521 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	STYX	Q8WUJ0	223 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	THOC3	Q96J01	351 aa	Known RBP	5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	ZSCAN31	Q96LW9	406 aa	Predicted RBP	5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	NUDT16L1	Q9BRJ7	211 aa	Known RBP	5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	KATNAL1	Q9BW62	490 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	IL21R	Q9HBE5	538 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	SPAG4	Q9NPE6	437 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	SH3GLB2	Q9NR46	395 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	HERC5	Q9UII4	1024 aa	Known RBP	5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	RAB21	Q9UL25	225 aa		5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	COPG1	Q9Y678	874 aa	Known RBP	5.07	□□□□□ -1.6
ATP2B1-208	ENST00000551009	FOXO6	A8MYZ6	492 aa		5.06	□□□□□ -1.6
ATP2B1-208	ENST00000551009	MCIDAS	D6RGH6	385 aa		5.06	□□□□□ -1.6
ATP2B1-208	ENST00000551009	RHOD	O00212	210 aa		5.06	□□□□□ -1.6
ATP2B1-208	ENST00000551009	SYT5	O00445	386 aa		5.06	□□□□□ -1.6
ATP2B1-208	ENST00000551009	KRT9	P35527	623 aa		5.06	□□□□□ -1.6
ATP2B1-208	ENST00000551009	PGGT1B	P53609	377 aa		5.06	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TAF12	Q16514	161 aa		5.06	□□□□□ -1.6
ATP2B1-208	ENST00000551009	PRTG	Q2VWP7	1150 aa		5.06	□□□□□ -1.6
ATP2B1-208	ENST00000551009	ARMC3	Q5W041	872 aa		5.06	□□□□□ -1.6
ATP2B1-208	ENST00000551009	NFRKB	Q6P4R8	1299 aa		5.06	□□□□□ -1.6
ATP2B1-208	ENST00000551009	FASTKD5	Q7L8L6	764 aa	Known RBP	5.06	□□□□□ -1.6
ATP2B1-208	ENST00000551009	TBC1D1	Q86TI0	1168 aa	Predicted RBP	5.06	□□□□□ -1.6
ATP2B1-208	ENST00000551009	RBMXL3	Q8N7X1	1067 aa	Known RBP	5.06	□□□□□ -1.6
ATP2B1-208	ENST00000551009	GOLGA1	Q92805	767 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms