RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 HDAC3O15379 428 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 ESRRBO95718 433 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 BCL10O95999 233 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 GPD1P21695 349 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 PAX3P23760 479 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 RCVRNP35243 200 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 RPL14P50914 215 aaKnown RBP12.34□□□□□ -0.43
VDR-208ENST00000550325 PRKCEQ02156 737 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 AGKQ53H12 422 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 ZNF618Q5T7W0 954 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 HHIPL2Q6UWX4 724 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 XYLT1Q86Y38 959 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 TICAM1Q8IUC6 712 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 ATP6V0A1Q93050 837 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 OMDQ99983 421 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 INO80BQ9C086 356 aaPredicted RBP12.34□□□□□ -0.43
VDR-208ENST00000550325 RPF2Q9H7B2 306 aaKnown RBP12.34□□□□□ -0.43
VDR-208ENST00000550325 PCDH12Q9NPG4 1184 aa12.34□□□□□ -0.43
VDR-208ENST00000550325 TCRBV5S1A1TA0A578 114 aa12.33□□□□□ -0.43
VDR-208ENST00000550325 CLOCKO15516 846 aa12.33□□□□□ -0.43
VDR-208ENST00000550325 PHGDHO43175 533 aaKnown RBP12.33□□□□□ -0.43
VDR-208ENST00000550325 MT-ND1P03886 318 aa12.33□□□□□ -0.43
VDR-208ENST00000550325 JAK1P23458 1154 aa12.33□□□□□ -0.43
VDR-208ENST00000550325 CNTFP26441 200 aa12.33□□□□□ -0.43
VDR-208ENST00000550325 RAB39AQ14964 217 aa12.33□□□□□ -0.43
VDR-208ENST00000550325 RC3H1Q5TC82 1133 aaKnown RBP12.33□□□□□ -0.43
VDR-208ENST00000550325 TBC1D15Q8TC07 691 aa12.33□□□□□ -0.43
VDR-208ENST00000550325 APOL2Q9BQE5 337 aa12.33□□□□□ -0.43
VDR-208ENST00000550325 SLC2A11Q9BYW1 496 aa12.33□□□□□ -0.43
VDR-208ENST00000550325 NMRAL1Q9HBL8 299 aa12.33□□□□□ -0.43
VDR-208ENST00000550325 MKS1Q9NXB0 559 aa12.33□□□□□ -0.43
VDR-208ENST00000550325 EGFL7Q9UHF1 273 aa12.33□□□□□ -0.43
VDR-208ENST00000550325 TLK1Q9UKI8 766 aa12.33□□□□□ -0.43
VDR-208ENST00000550325 CNOT6Q9ULM6 557 aaKnown RBP12.33□□□□□ -0.43
VDR-208ENST00000550325 FAM32AQ9Y421 112 aaKnown RBP12.33□□□□□ -0.43
VDR-208ENST00000550325 HEATR9A2RTY3 570 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.33□□□□□ -0.44
VDR-208ENST00000550325 TFEBP19484 476 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 HARS2P49590 506 aaKnown RBP12.33□□□□□ -0.44
VDR-208ENST00000550325 TBCELQ5QJ74 424 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 METTL21CQ5VZV1 264 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 KCTD8Q6ZWB6 473 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 PIWIL1Q96J94 861 aaKnown RBP12.33□□□□□ -0.44
VDR-208ENST00000550325 ZMAT2Q96NC0 199 aaKnown RBP12.33□□□□□ -0.44
VDR-208ENST00000550325 AGAP2Q99490 1192 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 ZFYVE28Q9HCC9 887 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 SYBUQ9NX95 663 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 TMED5Q9Y3A6 229 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 TOR1BO14657 336 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 MED7O43513 233 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 DGAT1O75907 488 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 S100BP04271 92 aaPredicted RBP12.33□□□□□ -0.44
VDR-208ENST00000550325 KRT76Q01546 638 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 DGKZQ13574 1117 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 SPIDRQ14159 915 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 PGS1Q32NB8 556 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 THOC7Q6I9Y2 204 aaKnown RBP12.33□□□□□ -0.44
VDR-208ENST00000550325 CHSY3Q70JA7 882 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 CARM1Q86X55 608 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 CDKL3Q8IVW4 592 aaPredicted RBP12.33□□□□□ -0.44
VDR-208ENST00000550325 PCDH19Q8TAB3 1148 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 EIF2AQ9BY44 585 aaKnown RBP12.33□□□□□ -0.44
VDR-208ENST00000550325 ZNF518BQ9C0D4 1074 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 ZDHHC2Q9UIJ5 367 aa12.33□□□□□ -0.44
VDR-208ENST00000550325 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
VDR-208ENST00000550325 ASS1P00966 412 aaKnown RBP12.32□□□□□ -0.44
VDR-208ENST00000550325 IDO1P14902 403 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 CD151P48509 253 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 TXNL4AP83876 142 aaKnown RBP12.32□□□□□ -0.44
VDR-208ENST00000550325 DPYSQ14117 519 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 TRIM25Q14258 630 aaKnown RBP12.32□□□□□ -0.44
VDR-208ENST00000550325 CANT1Q8WVQ1 401 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 LRRC39Q96DD0 335 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 HERC2P3Q9BVR0 1158 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 ADNPQ9H2P0 1102 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 ATAD3AQ9NVI7 634 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 SPDYE2BA6NHP3 402 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 SPDYE6P0CI01 402 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 EMC2Q15006 297 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 SPDYE2Q495Y8 402 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 RSBN1LQ6PCB5 846 aaPredicted RBP12.32□□□□□ -0.44
VDR-208ENST00000550325 ALDH16A1Q8IZ83 802 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 ZNF597Q96LX8 424 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 LGMNQ99538 433 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 SMOXQ9NWM0 555 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 GPRC5DQ9NZD1 345 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 COPG1Q9Y678 874 aaKnown RBP12.32□□□□□ -0.44
VDR-208ENST00000550325 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.32□□□□□ -0.44
VDR-208ENST00000550325 C9JVG2 144 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 CYP2F1P24903 491 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 GP5P40197 560 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 TPD52P55327 224 aaPredicted RBP12.32□□□□□ -0.44
VDR-208ENST00000550325 PRKCQQ04759 706 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 DUOXA2Q1HG44 320 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 SLFN12LQ6IEE8 588 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 LYSMD3Q7Z3D4 306 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 RNF135Q8IUD6 432 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 COLGALT1Q8NBJ5 622 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 ACMSDQ8TDX5 336 aa12.32□□□□□ -0.44
VDR-208ENST00000550325 ZC3H15Q8WU90 426 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms