RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 GARSP41250 739 aaKnown RBP9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 FNTAP49354 379 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 RENBPP51606 427 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 DYNLT1P63172 113 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 TUBB4BP68371 445 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 IL10RBQ08334 325 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 LMAN2Q12907 356 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 ZNF211Q13398 564 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 SERINC3Q13530 473 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 CCNG2Q16589 344 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 INO80DQ53TQ3 878 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 DGKKQ5KSL6 1271 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 HEATR6Q6AI08 1181 aaKnown RBP9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 SDE2Q6IQ49 451 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 CIR1Q86X95 450 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 PQLC3Q8N755 202 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 CEP112Q8N8E3 955 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 CCNYQ8ND76 341 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 CCHCR1Q8TD31 782 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 TFB1MQ8WVM0 346 aaKnown RBP9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 FAM3CQ92520 227 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 TTC17Q96AE7 1141 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 UHRF1Q96T88 793 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 FEM1AQ9BSK4 669 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 HEMGNQ9BXL5 484 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 ACE2Q9BYF1 805 aaPredicted RBP9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 OSBPL6Q9BZF3 934 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 FBRSQ9HAH7 460 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 ARHGEF3Q9NR81 526 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 DTLQ9NZJ0 730 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 ZNF212Q9UDV6 495 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 STARD13Q9Y3M8 1113 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 NCOR1O75376 2440 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 SHROOM3Q8TF72 1996 aa9.99□□□□□ -0.81
SMARCD1-206ENST00000549274 GOLGA6CA6NDK9 693 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 GOLGA6BA6NDN3 693 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 H7C0C1 242 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 KRIT1O00522 736 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 PRAMEF11O60813 436 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 DLDP09622 509 aaKnown RBP9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 GOLGA6DP0CG33 693 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 CES1P23141 567 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 CHRNA3P32297 505 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 OPRD1P41143 372 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 MAPK8P45983 427 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 ATP5OP48047 213 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 PAPOLAP51003 745 aaKnown RBP9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 SGSHP51688 502 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 STARD6P59095 220 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 EIF3EP60228 445 aaKnown RBP9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 MRPS21P82921 87 aaKnown RBP9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 ECT2LQ008S8 904 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 OTUD4Q01804 1114 aaKnown RBP9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 PPIDQ08752 370 aaKnown RBP9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 HNRNPDQ14103 355 aaKnown RBP9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 GRM3Q14832 879 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 SLC45A4Q5BKX6 768 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 TMEM196Q5HYL7 178 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 PITRM1Q5JRX3 1037 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 RALGPS1Q5JS13 557 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 MBLAC2Q68D91 279 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 CCDC70Q6NSX1 233 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 TPRG1Q6ZUI0 275 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 ARHGAP12Q8IWW6 846 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 CCDC13Q8IYE1 715 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 NAT16Q8N8M0 369 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 ACTL9Q8TC94 416 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 ISG20Q96AZ6 181 aaKnown RBP9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 HMCESQ96FZ2 354 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 OLFM3Q96PB7 478 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 SPON2Q9BUD6 331 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 CIPCQ9C0C6 399 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 CEP44Q9C0F1 390 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 HEBP1Q9NRV9 189 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 ELOVL2Q9NXB9 296 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 GOLGA6AQ9NYA3 693 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 UBA2Q9UBT2 640 aaPredicted RBP9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 SEPT3Q9UH03 358 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 IPO11Q9UI26 975 aaKnown RBP9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 TRHDEQ9UKU6 1024 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 HS3ST2Q9Y278 367 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 OR51B4Q9Y5P0 310 aa9.98□□□□□ -0.81
SMARCD1-206ENST00000549274 COL4A3Q01955 1670 aa9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 BCLAF3A2AJT9 711 aaKnown RBP9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 CBX4O00257 560 aa9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 MATN3O15232 486 aa9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 ZBTB24O43167 697 aaPredicted RBP9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 DCXO43602 365 aa9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 ATG13O75143 517 aa9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 GAS8O95995 478 aa9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 ITGAVP06756 1048 aa9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 CISD3P0C7P0 127 aa9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 RBP3P10745 1247 aa9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 HNRNPLP14866 589 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 CA4P22748 312 aa9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 CD70P32970 193 aa9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 RECQLP46063 649 aaPredicted RBP9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 GBE1Q04446 702 aa9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 SIGLEC14Q08ET2 396 aa9.97□□□□□ -0.81
SMARCD1-206ENST00000549274 AP1B1Q10567 949 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms