RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 CCDC38Q502W7 563 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 MPPE1Q53F39 396 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 PRSS36Q5K4E3 855 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 MPP7Q5T2T1 576 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 FAXCQ5TGI0 409 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 ADGRD2Q7Z7M1 963 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 CIR1Q86X95 450 aaPredicted RBP12.64□□□□□ -0.39
RAB5B-204ENST00000548068 ZBED8Q8IZ13 594 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 BBS5Q8N3I7 341 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 ATP11CQ8NB49 1132 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 ADAMTS19Q8TE59 1207 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 DEPDC1BQ8WUY9 529 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 ZNF707Q96C28 371 aaPredicted RBP12.64□□□□□ -0.39
RAB5B-204ENST00000548068 TIFAQ96CG3 184 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 SLC46A2Q9BY10 475 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 KIF9Q9HAQ2 790 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 DNAJC17Q9NVM6 304 aaKnown RBP12.64□□□□□ -0.39
RAB5B-204ENST00000548068 NINJ2Q9NZG7 142 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 AAR2Q9Y312 384 aaKnown RBP12.64□□□□□ -0.39
RAB5B-204ENST00000548068 A0A087WUV0 522 aaPredicted RBP12.63□□□□□ -0.39
RAB5B-204ENST00000548068 TCRBV7S3A2A0A539 114 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 ZBTB24O43167 697 aaPredicted RBP12.63□□□□□ -0.39
RAB5B-204ENST00000548068 GREM1O60565 184 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 TSPAN3O60637 253 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 PRAMEF11O60813 436 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 TBL1XO60907 577 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 AP2A1O95782 977 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 CYBBP04839 570 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 MYZAPP0CAP1 466 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 GJA1P17302 382 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 NFKB1P19838 968 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 WEE1P30291 646 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 CCR2P41597 374 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 GEMP55040 296 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 RPS24P62847 133 aaKnown RBP12.63□□□□□ -0.39
RAB5B-204ENST00000548068 TNK2Q07912 1038 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 SLC29A2Q14542 456 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 BBS9Q3SYG4 887 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 CEP85LQ5SZL2 805 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 MARC1Q5VT66 337 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 ARHGAP36Q6ZRI8 547 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 GRASPQ7Z6J2 395 aaPredicted RBP12.63□□□□□ -0.39
RAB5B-204ENST00000548068 LINC00523Q86TU6 105 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 CFAP52Q8N1V2 620 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 KIAA1958Q8N8K9 716 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 ZNF557Q8N988 423 aaPredicted RBP12.63□□□□□ -0.39
RAB5B-204ENST00000548068 TDRD5Q8NAT2 981 aaKnown RBP12.63□□□□□ -0.39
RAB5B-204ENST00000548068 SH3RF2Q8TEC5 729 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 PYROXD1Q8WU10 500 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 ARHGEF2Q92974 986 aaKnown RBP12.63□□□□□ -0.39
RAB5B-204ENST00000548068 WBP2Q969T9 261 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 TCEAL4Q96EI5 215 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 TMA16Q96EY4 203 aaKnown RBP12.63□□□□□ -0.39
RAB5B-204ENST00000548068 AGAP3Q96P47 875 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 SERPINB12Q96P63 405 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 SH3GL2Q99962 352 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 TMEM109Q9BVC6 243 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 CEP41Q9BYV8 373 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 ROPN1BQ9BZX4 212 aaPredicted RBP12.63□□□□□ -0.39
RAB5B-204ENST00000548068 LRRC40Q9H9A6 602 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 PPCSQ9HAB8 311 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 ROPN1Q9HAT0 212 aaPredicted RBP12.63□□□□□ -0.39
RAB5B-204ENST00000548068 GLOD4Q9HC38 313 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 TDP1Q9NUW8 608 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 TBC1D14Q9P2M4 693 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 TBC1D30Q9Y2I9 924 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 MRPS23Q9Y3D9 190 aaKnown RBP12.63□□□□□ -0.39
RAB5B-204ENST00000548068 CEP290O15078 2479 aa12.63□□□□□ -0.39
RAB5B-204ENST00000548068 MYO18AQ92614 2054 aaKnown RBP12.62□□□□□ -0.39
RAB5B-204ENST00000548068 H0Y626 953 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 GFRA2O00451 464 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 SLC9A3R1O14745 358 aaPredicted RBP12.62□□□□□ -0.39
RAB5B-204ENST00000548068 MOSPD3O75425 235 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 SUN1O94901 812 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 LUC7L3O95232 432 aaKnown RBP12.62□□□□□ -0.39
RAB5B-204ENST00000548068 ACSL3O95573 720 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 GSTA2P09210 222 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 MAGEA3P43357 314 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 MMP13P45452 471 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 USP4Q13107 963 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 CDH18Q13634 790 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 RFTN1Q14699 578 aaPredicted RBP12.62□□□□□ -0.39
RAB5B-204ENST00000548068 STAT4Q14765 748 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 KYNUQ16719 465 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 SLC5A9Q2M3M2 681 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 KRT71Q3SY84 523 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 FNBP1LQ5T0N5 605 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 STXBP5Q5T5C0 1151 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 ZNF697Q5TEC3 545 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 IL31Q6EBC2 164 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 NAPEPLDQ6IQ20 393 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 LRRC8BQ6P9F7 803 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 CCNJLQ8IV13 435 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 PDCD7Q8N8D1 485 aaKnown RBP12.62□□□□□ -0.39
RAB5B-204ENST00000548068 ZSCAN18Q8TBC5 510 aaPredicted RBP12.62□□□□□ -0.39
RAB5B-204ENST00000548068 OTUB2Q96DC9 234 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 PABPC5Q96DU9 382 aaKnown RBP12.62□□□□□ -0.39
RAB5B-204ENST00000548068 MYEOVQ96EZ4 313 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 C9orf72Q96LT7 481 aa12.62□□□□□ -0.39
RAB5B-204ENST00000548068 PWWP2AQ96N64 755 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms