RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TRIM16O95361 564 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 F9P00740 461 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 MMEP08473 750 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 ATXN1LP0C7T5 689 aaKnown RBP6.89□□□□□ -1.31
SCAF11-211ENST00000547950 CCNYL3P0C7X3 344 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 FTH1P19P0C7X4 201 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 UCHL3P15374 230 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 GOT1P17174 413 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 C5AR1P21730 350 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 CXCR3P49682 368 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 KLK7P49862 253 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 PLK1P53350 603 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 METAP1P53582 386 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 C21orf59P57076 290 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 RACK1P63244 317 aaKnown RBP6.89□□□□□ -1.31
SCAF11-211ENST00000547950 IL9RQ01113 521 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 DEUP1Q05D60 604 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 MTA1Q13330 715 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 DLG2Q15700 870 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 LINC01559Q495D7 138 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 CCDC157Q569K6 752 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 FAM102AQ5T9C2 384 aaPredicted RBP6.89□□□□□ -1.31
SCAF11-211ENST00000547950 NAA35Q5VZE5 725 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 CXorf57Q6NSI4 855 aaKnown RBP6.89□□□□□ -1.31
SCAF11-211ENST00000547950 SLCO6A1Q86UG4 719 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 ZDHHC17Q8IUH5 632 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 ATP11CQ8NB49 1132 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 ZNF397Q8NF99 534 aaPredicted RBP6.89□□□□□ -1.31
SCAF11-211ENST00000547950 OR52K2Q8NGK3 314 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 OR2T34Q8NGX1 318 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 ENOX1Q8TC92 643 aaKnown RBP6.89□□□□□ -1.31
SCAF11-211ENST00000547950 FRS2Q8WU20 508 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 OR8D1Q8WZ84 308 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 GATA6Q92908 595 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 ALG14Q96F25 216 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 PCMTD1Q96MG8 357 aaPredicted RBP6.89□□□□□ -1.31
SCAF11-211ENST00000547950 SLC6A18Q96N87 628 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 TBCBQ99426 244 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 ORAI3Q9BRQ5 295 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 SPON2Q9BUD6 331 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 ACE2Q9BYF1 805 aaPredicted RBP6.89□□□□□ -1.31
SCAF11-211ENST00000547950 EBF2Q9HAK2 575 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 OSGEPQ9NPF4 335 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 ANLNQ9NQW6 1124 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 AASDHPPTQ9NRN7 309 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 TMPRSS4Q9NRS4 437 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 LMBRD1Q9NUN5 540 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 RRN3Q9NYV6 651 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 SLC25A13Q9UJS0 675 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 PCOLCE2Q9UKZ9 415 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 SARDHQ9UL12 918 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 STAP1Q9ULZ2 295 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 APOBEC2Q9Y235 224 aaKnown RBP6.89□□□□□ -1.31
SCAF11-211ENST00000547950 BTBD3Q9Y2F9 522 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 MSRB2Q9Y3D2 182 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 CHD8Q9HCK8 2581 aa6.89□□□□□ -1.31
SCAF11-211ENST00000547950 TPRP12270 2363 aaKnown RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 EML5Q05BV3 1969 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 THADAQ6YHU6 1953 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 ITIH6Q6UXX5 1313 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 A0A1W2PPC4 97 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 I6L893 689 aaPredicted RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 K7ERQ8 282 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 WNT9AO14904 365 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 VILLO15195 856 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 FLRT2O43155 660 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 ATP9BO43861 1147 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 SNAP91O60641 907 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 CBFA2T3O75081 653 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 RTN2O75298 545 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 ENDOD1O94919 500 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 MT-CO1P00395 513 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 TPM2P07951 284 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 ZNF883P0CG24 379 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 EEF1GP26641 437 aaKnown RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 CD38P28907 300 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 OR1E1P30953 314 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 MAT2AP31153 395 aaKnown RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 FLT3P36888 993 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 ANP32AP39687 249 aaKnown RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 CTSKP43235 329 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 GABRB2P47870 512 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 GRIA4P48058 902 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 ADPRHP54922 357 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 CDH4P55283 916 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 POLR2FP61218 127 aaKnown RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 KRT83P78385 493 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 ATP11AP98196 1134 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 ELAVL3Q14576 367 aaKnown RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 SLC25A52Q3SY17 297 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 ALFQ53S48 1182 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 CT47A1Q5JQC4 288 aaPredicted RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 BRMS1LQ5PSV4 323 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 OTUD1Q5VV17 481 aaPredicted RBP6.88□□□□□ -1.31
SCAF11-211ENST00000547950 FAM46CQ5VWP2 391 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 LRRC31Q6UY01 552 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 LINGO4Q6UY18 593 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 DBX2Q6ZNG2 339 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 Q6ZVU0 165 aa6.88□□□□□ -1.31
SCAF11-211ENST00000547950 RAB44Q7Z6P3 723 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms