RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 LIG4P49917 911 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 ARL4CP56559 192 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 WDR4P57081 412 aaKnown RBP10.07□□□□□ -0.8
CDK4-205ENST00000547853 IRX4P78413 519 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 CDK18Q07002 472 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 SCAPQ12770 1279 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 MPP2Q14168 576 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 DCAF4L1Q3SXM0 396 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 CTXN3Q4LDR2 81 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 NAIF1Q69YI7 327 aaPredicted RBP10.07□□□□□ -0.8
CDK4-205ENST00000547853 CGB2Q6NT52 195 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 RNF19BQ6ZMZ0 732 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 GAREM2Q75VX8 874 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 MAEAQ7L5Y9 396 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 SYT13Q7L8C5 426 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 APBB1IPQ7Z5R6 666 aaPredicted RBP10.07□□□□□ -0.8
CDK4-205ENST00000547853 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDK4-205ENST00000547853 BPIFB1Q8TDL5 484 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 ATG4AQ8WYN0 398 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 BSNDQ8WZ55 320 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 EZH1Q92800 747 aaPredicted RBP10.07□□□□□ -0.8
CDK4-205ENST00000547853 ERP27Q96DN0 273 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 BICD1Q96G01 975 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 RMDN2Q96LZ7 410 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 SLITRK1Q96PX8 696 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 CGRRF1Q99675 332 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 DCLRE1BQ9H816 532 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 STOML1Q9UBI4 398 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 MAFFQ9ULX9 164 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 ZNF148Q9UQR1 794 aa10.07□□□□□ -0.8
CDK4-205ENST00000547853 UPK3BL1B0FP48 263 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 UPK3BL2E5RIL1 263 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 H7C4K7 107 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 PPP1R12AO14974 1030 aaPredicted RBP10.06□□□□□ -0.8
CDK4-205ENST00000547853 TYROBPO43914 113 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 CCDC22O60826 627 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 DNAJC6O75061 913 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 FAM155BO75949 473 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 C4BPAP04003 597 aaKnown RBP10.06□□□□□ -0.8
CDK4-205ENST00000547853 KRT1P04264 644 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 KRT7P08729 469 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 RPSAP08865 295 aaKnown RBP10.06□□□□□ -0.8
CDK4-205ENST00000547853 CHRM1P11229 460 aaPredicted RBP10.06□□□□□ -0.8
CDK4-205ENST00000547853 CPB1P15086 417 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 ACO1P21399 889 aaKnown RBP10.06□□□□□ -0.8
CDK4-205ENST00000547853 CA4P22748 312 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 MMP8P22894 467 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 POLR2BP30876 1174 aaKnown RBP10.06□□□□□ -0.8
CDK4-205ENST00000547853 FOXN2P32314 431 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 MAPK8P45983 427 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 ARSEP51690 589 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 GRSF1Q12849 480 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDK4-205ENST00000547853 SEMA3BQ13214 749 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 DMC1Q14565 340 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 LBRQ14739 615 aaKnown RBP10.06□□□□□ -0.8
CDK4-205ENST00000547853 TAF11Q15544 211 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 HIF1AQ16665 826 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 ACCSLQ4AC99 568 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 TFDP3Q5H9I0 405 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 UBAP2Q5T6F2 1119 aaKnown RBP10.06□□□□□ -0.8
CDK4-205ENST00000547853 RNASEH2BQ5TBB1 312 aaKnown RBP10.06□□□□□ -0.8
CDK4-205ENST00000547853 CAPRIN2Q6IMN6 1127 aaKnown RBP10.06□□□□□ -0.8
CDK4-205ENST00000547853 DNAJC24Q6P3W2 148 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 SPOCD1Q6ZMY3 1216 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 CHSY1Q86X52 802 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 ZBTB8OSQ8IWT0 167 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 PPIL6Q8IXY8 311 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 CYP4X1Q8N118 509 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 CHCHD4Q8N4Q1 142 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 TMEM35BQ8NCS4 154 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 C10orf82Q8WW14 230 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 NAF1Q96HR8 494 aaKnown RBP10.06□□□□□ -0.8
CDK4-205ENST00000547853 C9orf72Q96LT7 481 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 FAM83CQ9BQN1 747 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 ADPGKQ9BRR6 497 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 MYLK2Q9H1R3 596 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 SLC32A1Q9H598 525 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 VPS37BQ9H9H4 285 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 CYLDQ9NQC7 956 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 WDR35Q9P2L0 1181 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 ZFP69BQ9UJL9 534 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 STK38LQ9Y2H1 464 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 R3HDM2Q9Y2K5 976 aaKnown RBP10.06□□□□□ -0.8
CDK4-205ENST00000547853 MTO1Q9Y2Z2 717 aaKnown RBP10.06□□□□□ -0.8
CDK4-205ENST00000547853 PCDHB4Q9Y5E5 795 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 ATMQ13315 3056 aa10.06□□□□□ -0.8
CDK4-205ENST00000547853 hCG_1818297A0A087WSY0 165 aa10.05□□□□□ -0.8
CDK4-205ENST00000547853 IQANK1A0A1B0GTG1 560 aa10.05□□□□□ -0.8
CDK4-205ENST00000547853 SMIM28A0A1B0GU29 152 aa10.05□□□□□ -0.8
CDK4-205ENST00000547853 TMEM191CA6NGB0 347 aa10.05□□□□□ -0.8
CDK4-205ENST00000547853 E7ESA3 106 aa10.05□□□□□ -0.8
CDK4-205ENST00000547853 H0Y626 953 aa10.05□□□□□ -0.8
CDK4-205ENST00000547853 SMNDC1O75940 238 aaKnown RBP eCLIP10.05□□□□□ -0.8
CDK4-205ENST00000547853 C1QL1O75973 258 aa10.05□□□□□ -0.8
CDK4-205ENST00000547853 TRIM16O95361 564 aa10.05□□□□□ -0.8
CDK4-205ENST00000547853 TMEM191BP0C7N4 346 aa10.05□□□□□ -0.8
CDK4-205ENST00000547853 CREB1P16220 341 aa10.05□□□□□ -0.8
CDK4-205ENST00000547853 ENGP17813 658 aa10.05□□□□□ -0.8
CDK4-205ENST00000547853 GNAZP19086 355 aa10.05□□□□□ -0.8
CDK4-205ENST00000547853 TNNI1P19237 187 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms