RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 OR7D4Q8NG98 312 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 TPCN2Q8NHX9 752 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 FAF2Q96CS3 445 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 PDLIM2Q96JY6 352 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 CSPG4P5Q96PW8 444 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 ZNF670Q9BS34 389 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 LRRC19Q9H756 370 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 PRDM16Q9HAZ2 1276 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 PRSS16Q9NQE7 514 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 DDX56Q9NY93 547 aaKnown RBP14.81□□□□□ -0.04
DDX54-203ENST00000546869 SALL4Q9UJQ4 1053 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 HPCAL4Q9UM19 191 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 TFR2Q9UP52 801 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 ADGRG1Q9Y653 693 aa14.81□□□□□ -0.04
DDX54-203ENST00000546869 CACNA1HO95180 2353 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 RASA4BC9J798 803 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 DCLK1O15075 740 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 RASA4O43374 803 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 SRCP12931 536 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 HLA-EP13747 358 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 KDELR1P24390 212 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 FNTBP49356 437 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 COPAP53621 1224 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 ZBTB16Q05516 673 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 DMWDQ09019 674 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 SERINC3Q13530 473 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 BYSLQ13895 437 aaKnown RBP14.8□□□□□ -0.04
DDX54-203ENST00000546869 DPYSL3Q14195 570 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 KRT81Q14533 505 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 IFI16Q16666 785 aaKnown RBP14.8□□□□□ -0.04
DDX54-203ENST00000546869 C9orf64Q5T6V5 341 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 IL31Q6EBC2 164 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 KIAA1328Q86T90 577 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 CPNE8Q86YQ8 564 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 PLPP6Q8IY26 295 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 RNF10Q8N5U6 811 aaKnown RBP14.8□□□□□ -0.04
DDX54-203ENST00000546869 OR2T3Q8NH03 318 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 CASKIN2Q8WXE0 1202 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 PTPRN2Q92932 1015 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 RPL10LQ96L21 214 aaKnown RBP14.8□□□□□ -0.04
DDX54-203ENST00000546869 MRGPRX1Q96LB2 322 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 SPON2Q9BUD6 331 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 CEP44Q9C0F1 390 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 RAD54BQ9Y620 910 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 DUSP10Q9Y6W6 482 aa14.8□□□□□ -0.04
DDX54-203ENST00000546869 MUC22E2RYF6 1773 aaPredicted RBP14.8□□□□□ -0.04
DDX54-203ENST00000546869 TMEM110-MUSTN1A8MSY1 372 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 TTC34A8MYJ7 566 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 CBX4O00257 560 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 PSTPIP1O43586 416 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 SNAP91O60641 907 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 ZNF217O75362 1048 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 CD160O95971 181 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 MT-CO1P00395 513 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 ACVRL1P37023 503 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 STK19P49842 368 aaPredicted RBP14.79□□□□□ -0.04
DDX54-203ENST00000546869 ARF5P84085 180 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 CCZ1BP86790 482 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 CCZ1P86791 482 aaPredicted RBP14.79□□□□□ -0.04
DDX54-203ENST00000546869 DLG2Q15700 870 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 USP39Q53GS9 565 aaKnown RBP14.79□□□□□ -0.04
DDX54-203ENST00000546869 INO80DQ53TQ3 878 aaPredicted RBP14.79□□□□□ -0.04
DDX54-203ENST00000546869 ANO7Q6IWH7 933 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 MUC6Q6W4X9 2439 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 C11orf74Q86VG3 221 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 TMPRSS6Q8IU80 811 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 LRRC49Q8IUZ0 686 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 HMGB4Q8WW32 186 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 ISG20Q96AZ6 181 aaKnown RBP14.79□□□□□ -0.04
DDX54-203ENST00000546869 TSGA10Q9BZW7 698 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 MKRN2Q9H000 416 aaKnown RBP14.79□□□□□ -0.04
DDX54-203ENST00000546869 RSPH9Q9H1X1 276 aaPredicted RBP14.79□□□□□ -0.04
DDX54-203ENST00000546869 ITM2CQ9NQX7 267 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 SCML1Q9UN30 329 aa14.79□□□□□ -0.04
DDX54-203ENST00000546869 MYO18AQ92614 2054 aaKnown RBP14.78□□□□□ -0.04
DDX54-203ENST00000546869 ATG2BQ96BY7 2078 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 ARHGAP42A6NI28 874 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 C3orf70A6NLC5 250 aaPredicted RBP14.78□□□□□ -0.04
DDX54-203ENST00000546869 MCF2LO15068 1137 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 ALOX15BO15296 676 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 HRO43593 1189 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 SPOPO43791 374 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 IGLV3-19P01714 112 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 CD48P09326 243 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 NDUFV2P19404 249 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 AMPD1P23109 780 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 GLDCP23378 1020 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 SERPINB6P35237 376 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 PXNP49023 591 aaPredicted RBP14.78□□□□□ -0.04
DDX54-203ENST00000546869 SERPINH1P50454 418 aaKnown RBP14.78□□□□□ -0.04
DDX54-203ENST00000546869 NHLH1Q02575 133 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 ELAVL3Q14576 367 aaKnown RBP14.78□□□□□ -0.04
DDX54-203ENST00000546869 ANKRD20A8PQ5CZ79 823 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 TMCO3Q6UWJ1 677 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 DAAM2Q86T65 1068 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 ARHGAP12Q8IWW6 846 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 LRRC57Q8N9N7 239 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 ATP11CQ8NB49 1132 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 KIAA1524Q8TCG1 905 aa14.78□□□□□ -0.04
DDX54-203ENST00000546869 GAB3Q8WWW8 586 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms