RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 CCDC3Q9BQI4 270 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 MINDY3Q9H8M7 445 aa12.04□□□□□ -0.48
CHERP-203ENST00000546361 TDRKHQ9Y2W6 561 aaKnown RBP12.04□□□□□ -0.48
CHERP-203ENST00000546361 NCANO14594 1321 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 RAD51BO15315 384 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 PHGDHO43175 533 aaKnown RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 TRIM13O60858 407 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 CCL5P13501 91 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 CYP2A7P20853 494 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 RFX3P48380 749 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 SKOR1P84550 965 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 FAAP100Q0VG06 881 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 ZNF792Q3KQV3 632 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 RARS2Q5T160 578 aaKnown RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 ACBD5Q5T8D3 534 aaPredicted RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 PLEKHA7Q6IQ23 1121 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 GDF6Q6KF10 455 aaPredicted RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 UNC5AQ6ZN44 842 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 SLC26A9Q7LBE3 791 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 HNRNPABQ99729 332 aaKnown RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 RNF39Q9H2S5 420 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 M0R2N6 131 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 FSCN2O14926 492 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 CCL16O15467 120 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 NOL4O94818 638 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 C1RP00736 705 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 CYP1A1P04798 512 aaPredicted RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 CTSEP14091 401 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 HOXB8P17481 243 aaPredicted RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 BGNP21810 368 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 LMO2P25791 158 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 PTPN3P26045 913 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 CRABP2P29373 138 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 CCND3P30281 292 aaPredicted RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 PBX1P40424 430 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 PFKPQ01813 784 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 TP53BP2Q13625 1128 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 TIGD5Q53EQ6 642 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 C16orf89Q6UX73 402 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 TMEM192Q8IY95 271 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 MED8Q96G25 268 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 HES6Q96HZ4 224 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 SERAC1Q96JX3 654 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 CDHR5Q9HBB8 845 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 AGO1Q9UL18 857 aaKnown RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 RAD54BQ9Y620 910 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 CICQ96RK0 1608 aaPredicted RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 C1orf232A0A0U1RR37 186 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 ZBTB14O43829 449 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 CLDN11O75508 207 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 SNAI1O95863 264 aaPredicted RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 SYN1P17600 705 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 AQP5P55064 265 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 EIF2B5Q13144 721 aaKnown RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 PRSS55Q6UWB4 352 aaPredicted RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 SLC22A9Q8IVM8 553 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 SUGP1Q8IWZ8 645 aaKnown RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 AGGF1Q8N302 714 aaeCLIP12.03□□□□□ -0.48
CHERP-203ENST00000546361 FBXO22Q8NEZ5 403 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 TCP10LQ8TDR4 215 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 TFAP2BQ92481 460 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 GAS2L1Q99501 681 aaPredicted RBP12.03□□□□□ -0.48
CHERP-203ENST00000546361 CPNE1Q99829 537 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 NMRAL1Q9HBL8 299 aa12.03□□□□□ -0.48
CHERP-203ENST00000546361 CCT8L1PA6NM43 557 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 BTNL10A8MVZ5 291 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 NEDD8-MDP1E9PL57 170 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 BTN3A1O00481 513 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 AKAP10O43572 662 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 KATNA1O75449 491 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 F2P00734 622 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 CATP04040 527 aaKnown RBP12.02□□□□□ -0.48
CHERP-203ENST00000546361 CCNG1P51959 295 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 NME5P56597 212 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 CDK18Q07002 472 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 FSTL1Q12841 308 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 INSCQ1MX18 579 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 KDM7AQ6ZMT4 941 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 METTL3Q86U44 580 aaKnown RBP12.02□□□□□ -0.48
CHERP-203ENST00000546361 FAM228AQ86W67 206 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 STK40Q8N2I9 435 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 CXorf40AQ8TE69 158 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 MCRS1Q96EZ8 462 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 P2RY11Q96G91 374 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 NAF1Q96HR8 494 aaKnown RBP12.02□□□□□ -0.48
CHERP-203ENST00000546361 NSL1Q96IY1 281 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 RBBP8Q99708 897 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 LRRC19Q9H756 370 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 APOBEC3GQ9HC16 384 aaKnown RBP12.02□□□□□ -0.48
CHERP-203ENST00000546361 TBC1D14Q9P2M4 693 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 GABRQQ9UN88 632 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 SNX5Q9Y5X3 404 aa12.02□□□□□ -0.48
CHERP-203ENST00000546361 F8W810 466 aa12.02□□□□□ -0.49
CHERP-203ENST00000546361 CHADO15335 359 aa12.02□□□□□ -0.49
CHERP-203ENST00000546361 LRCH4O75427 683 aa12.02□□□□□ -0.49
CHERP-203ENST00000546361 STAU1O95793 577 aaKnown RBP12.02□□□□□ -0.49
CHERP-203ENST00000546361 PCNAP12004 261 aa12.02□□□□□ -0.49
CHERP-203ENST00000546361 CORO1AP31146 461 aaKnown RBP12.02□□□□□ -0.49
CHERP-203ENST00000546361 PURAQ00577 322 aaKnown RBP12.02□□□□□ -0.49
CHERP-203ENST00000546361 PKN2Q16513 984 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms