RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 TMLHEQ9NVH6 421 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 IL17BQ9UHF5 180 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 GPR160Q9UJ42 338 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.02□□□□□ -1.29
CCDC60-205ENST00000546345 LRRK1Q38SD2 2015 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 ITPR3Q14573 2671 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 ZFC3H1O60293 1989 aaKnown RBP7.01□□□□□ -1.29
CCDC60-205ENST00000546345 A0A1B0GTW7 788 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 BTBD18B2RXH4 712 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 MYO1CO00159 1063 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 PSPNO60542 156 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 NOL4O94818 638 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 CKMP06732 381 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 GP1BBP13224 206 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 HOXB2P14652 356 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 GCFC2P16383 781 aaKnown RBP7.01□□□□□ -1.29
CCDC60-205ENST00000546345 EIF2DP41214 584 aaKnown RBP7.01□□□□□ -1.29
CCDC60-205ENST00000546345 GTF2A1P52655 376 aaPredicted RBP7.01□□□□□ -1.29
CCDC60-205ENST00000546345 ZBTB6Q15916 424 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 TBC1D25Q3MII6 688 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 ANO6Q4KMQ2 910 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 LAYNQ6UX15 382 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 USP49Q70CQ1 688 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 SRLQ86TD4 932 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 ZNF227Q86WZ6 799 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 SPATS2Q86XZ4 545 aaKnown RBP7.01□□□□□ -1.29
CCDC60-205ENST00000546345 ARL14EPQ8N8R7 260 aaPredicted RBP7.01□□□□□ -1.29
CCDC60-205ENST00000546345 DEPTORQ8TB45 409 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 LRRC15Q8TF66 581 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 CACTINQ8WUQ7 758 aaKnown RBP7.01□□□□□ -1.29
CCDC60-205ENST00000546345 SNRNP27Q8WVK2 155 aaKnown RBP7.01□□□□□ -1.29
CCDC60-205ENST00000546345 MRPS31Q92665 395 aaKnown RBP7.01□□□□□ -1.29
CCDC60-205ENST00000546345 MED8Q96G25 268 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 TMEM176AQ96HP8 235 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 CCDC43Q96MW1 224 aaKnown RBP7.01□□□□□ -1.29
CCDC60-205ENST00000546345 PTCHD1Q96NR3 888 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 ACOX2Q99424 681 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 TARS2Q9BW92 718 aaKnown RBP7.01□□□□□ -1.29
CCDC60-205ENST00000546345 HAPLN2Q9GZV7 340 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 TRPC7Q9HCX4 862 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 MED4Q9NPJ6 270 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 HSPBP1Q9NZL4 362 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 ARHGAP26Q9UNA1 814 aa7.01□□□□□ -1.29
CCDC60-205ENST00000546345 CCDC196A0A1B0GTZ2 297 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 A0A1B0GVT2 93 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 CLEC18AA5D8T8 446 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 IKBKBO14920 756 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 TRIM24O15164 1050 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 PDPK1O15530 556 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 PAX4O43316 350 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 CCNT1O60563 726 aaKnown RBP7□□□□□ -1.29
CCDC60-205ENST00000546345 MED24O75448 989 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 APODP05090 189 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 MCF2P10911 925 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 HARSP12081 509 aaKnown RBP7□□□□□ -1.29
CCDC60-205ENST00000546345 GJB2P29033 226 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 MARCKSP29966 332 aaPredicted RBP7□□□□□ -1.29
CCDC60-205ENST00000546345 ADSSP30520 456 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 HOXC12P31275 282 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 WASP42768 502 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 TUFMP49411 452 aaKnown RBP7□□□□□ -1.29
CCDC60-205ENST00000546345 ACADVLP49748 655 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 CCZ1BP86790 482 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 CCZ1P86791 482 aaPredicted RBP7□□□□□ -1.29
CCDC60-205ENST00000546345 NFKB2Q00653 900 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 RESTQ13127 1097 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 TARDBPQ13148 414 aaKnown RBP eCLIP7□□□□□ -1.29
CCDC60-205ENST00000546345 IQCB1Q15051 598 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 DHCR24Q15392 516 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 SAFBQ15424 915 aaKnown RBP eCLIP7□□□□□ -1.29
CCDC60-205ENST00000546345 CT47A1Q5JQC4 288 aaPredicted RBP7□□□□□ -1.29
CCDC60-205ENST00000546345 ARHGAP40Q5TG30 622 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 HES3Q5TGS1 186 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 EGFLAMQ63HQ2 1017 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 GALNT18Q6P9A2 607 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 MPZL3Q6UWV2 235 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 CLEC18BQ6UXF7 455 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 RUFY3Q7L099 469 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 USP37Q86T82 979 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 JAMLQ86YT9 394 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 DAW1Q8N136 415 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 SPC24Q8NBT2 197 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 CLEC18CQ8NCF0 446 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 SPATA18Q8TC71 538 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 SPPL2BQ8TCT7 592 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 FGF11Q92914 225 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 TRMT2BQ96GJ1 504 aaKnown RBP7□□□□□ -1.29
CCDC60-205ENST00000546345 HIC2Q96JB3 615 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 ZBTB45Q96K62 511 aaPredicted RBP7□□□□□ -1.29
CCDC60-205ENST00000546345 MRGPRX1Q96LB2 322 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 SENP8Q96LD8 212 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 PNKPQ96T60 521 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 AGXT2Q9BYV1 514 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 RNF32Q9H0A6 362 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 ARHGEF4Q9NR80 690 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 GJB4Q9NTQ9 266 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 ARHGAP28Q9P2N2 729 aa7□□□□□ -1.29
CCDC60-205ENST00000546345 ORC3Q9UBD5 711 aaPredicted RBP7□□□□□ -1.29
CCDC60-205ENST00000546345 MAGED2Q9UNF1 606 aaPredicted RBP7□□□□□ -1.29
CCDC60-205ENST00000546345 KCNJ14Q9UNX9 436 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms