RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 RAB6AP20340 208 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 PSMA2P25787 234 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 IFNAR2P48551 515 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 HARS2P49590 506 aaKnown RBP6.56□□□□□ -1.36
PRKDC-211ENST00000546304 VAV2P52735 878 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 ZNF143P52747 638 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-211ENST00000546304 HDAC4P56524 1084 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 GPC5P78333 572 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 OGDHQ02218 1023 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 ID3Q02535 119 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 DEUP1Q05D60 604 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 RING1Q06587 406 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 ZNF252P-AS1Q0IIN9 211 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 NME3Q13232 169 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 PPP2R5DQ14738 602 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 C15orf59Q2T9L4 293 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-211ENST00000546304 CCDC14Q49A88 953 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 CC2D1AQ6P1N0 951 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-211ENST00000546304 SEZ6L2Q6UXD5 910 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 STRADAQ7RTN6 431 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 BNIPLQ7Z465 357 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 ZAR1Q86SH2 424 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 KIAA1328Q86T90 577 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 FAM131BQ86XD5 332 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 DTX1Q86Y01 620 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 MFSD6LQ8IWD5 586 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 LRRC8AQ8IWT6 810 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 BBS7Q8IWZ6 715 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 RHOT2Q8IXI1 618 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 YAF2Q8IY57 180 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 KIAA1958Q8N8K9 716 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 STK35Q8TDR2 534 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 FAM172AQ8WUF8 416 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 OSCP1Q8WVF1 389 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 ATP2A3Q93084 1043 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 WBP2Q969T9 261 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 PGAP3Q96FM1 320 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-211ENST00000546304 SLC39A13Q96H72 371 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 ZFYVE19Q96K21 471 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 FCRL2Q96LA5 508 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-211ENST00000546304 CNPY3Q9BT09 278 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 RPP25Q9BUL9 199 aaKnown RBP6.56□□□□□ -1.36
PRKDC-211ENST00000546304 TRMT61BQ9BVS5 477 aaKnown RBP6.56□□□□□ -1.36
PRKDC-211ENST00000546304 PLA2G2FQ9BZM2 168 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 C12orf49Q9H741 205 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 GKN1Q9NS71 199 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 CACNA2D2Q9NY47 1150 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 CALCOCO1Q9P1Z2 691 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 CTTNBP2NLQ9P2B4 639 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 DUSP12Q9UNI6 340 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 SORCS3Q9UPU3 1222 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 PAXBP1Q9Y5B6 917 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 PCDHA13Q9Y5I0 950 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 WNT6Q9Y6F9 365 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 CHD5Q8TDI0 1954 aa6.56□□□□□ -1.36
PRKDC-211ENST00000546304 NYNRINQ9P2P1 1898 aaKnown RBP6.56□□□□□ -1.36
PRKDC-211ENST00000546304 MYO18AQ92614 2054 aaKnown RBP6.55□□□□□ -1.36
PRKDC-211ENST00000546304 TMEM191CA6NGB0 347 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 ARNTLO00327 626 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 ENC1O14682 589 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 SLC9A3R1O14745 358 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-211ENST00000546304 CHADO15335 359 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 MTA2O94776 668 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 NFATC1O95644 943 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 F9P00740 461 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 KLKB1P03952 638 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 CYP17A1P05093 508 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 SLC2A3P11169 496 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 SRFP11831 508 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 ARSAP15289 507 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 GDI1P31150 447 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 CCR1P32246 355 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 GBP1P32455 592 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 ADMP35318 185 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 MAGEA1P43355 309 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 SLC11A2P49281 568 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 ATXN1P54253 815 aaKnown RBP6.55□□□□□ -1.36
PRKDC-211ENST00000546304 VCPP55072 806 aaKnown RBP6.55□□□□□ -1.36
PRKDC-211ENST00000546304 KRT83P78385 493 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 EIF4EBP2Q13542 120 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-211ENST00000546304 TDGQ13569 410 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 PDGFRLQ15198 375 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 ARHGAP29Q52LW3 1261 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 RAB6CQ53S08 254 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 ZC3H12AQ5D1E8 599 aaKnown RBP6.55□□□□□ -1.36
PRKDC-211ENST00000546304 BRMS1LQ5PSV4 323 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 TRIM68Q6AZZ1 485 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 DENND1CQ8IV53 801 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 UNC45BQ8IWX7 931 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 FAM217AQ8IXS0 508 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 TXLNBQ8N3L3 684 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 CPA6Q8N4T0 437 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 FBXL6Q8N531 539 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 NIPA2Q8N8Q9 360 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 DNASE1L2Q92874 299 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 RNF34Q969K3 372 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 OTUB2Q96DC9 234 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 BTN2A3PQ96KV6 586 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 OSBPL1AQ9BXW6 950 aa6.55□□□□□ -1.36
PRKDC-211ENST00000546304 DCLK3Q9C098 648 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms