RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 RETREG1Q9H6L5 497 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 LMAN1LQ9HAT1 526 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 ATP13A1Q9HD20 1204 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 DLGAP2Q9P1A6 1054 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 SLCO3A1Q9UIG8 710 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 STARD13Q9Y3M8 1113 aa16.67■□□□□ 0.26
LIMS2-217ENST00000545738 FAM86C2PA6NEL3 165 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 TIE1P35590 1138 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 NDST2P52849 883 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 C1orf228Q6PIY5 440 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 ZNF783Q6ZMS7 281 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 SUGP1Q8IWZ8 645 aaKnown RBP16.66■□□□□ 0.26
LIMS2-217ENST00000545738 DCAF4L2Q8NA75 395 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 IL17RCQ8NAC3 791 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 COG1Q8WTW3 980 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 ERLEC1Q96DZ1 483 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 SHDQ96IW2 340 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 MAGEH1Q9H213 219 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 CARD9Q9H257 536 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 MTG2Q9H4K7 406 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 PDFQ9HBH1 243 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 SMARCAL1Q9NZC9 954 aa16.66■□□□□ 0.26
LIMS2-217ENST00000545738 CBX4O00257 560 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 DFFAO00273 331 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 APOL1O14791 398 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 SMAD6O43541 496 aaKnown RBP16.65■□□□□ 0.26
LIMS2-217ENST00000545738 ADAM23O75077 832 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 PEX11BO96011 259 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 HNRNPLP14866 589 aaKnown RBP eCLIP16.65■□□□□ 0.26
LIMS2-217ENST00000545738 IL12RB1P42701 662 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 COPS2P61201 443 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 SLC12A1Q13621 1099 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 ZNF234Q14588 700 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 PARP15Q460N3 678 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 IL31Q6EBC2 164 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 BBS12Q6ZW61 710 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 ALLCQ8N6M5 410 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 RPLP0P6Q8NHW5 317 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 WFIKKN2Q8TEU8 576 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 USP33Q8TEY7 942 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 C16orf45Q96MC5 204 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-217ENST00000545738 OLFM3Q96PB7 478 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 CACNA2D2Q9NY47 1150 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 R3HDM2Q9Y2K5 976 aaKnown RBP16.65■□□□□ 0.26
LIMS2-217ENST00000545738 HEY1Q9Y5J3 304 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 CKAP5Q14008 2032 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 CACNA1IQ9P0X4 2223 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 ZNF185O15231 689 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 MAFKO60675 156 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 DLDP09622 509 aaKnown RBP16.65■□□□□ 0.26
LIMS2-217ENST00000545738 VAV1P15498 845 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 WASP42768 502 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 TNFRSF4P43489 277 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 YBEYP58557 167 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-217ENST00000545738 GALNT2Q10471 571 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 ODF2Q5BJF6 829 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 DGKKQ5KSL6 1271 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 CCDC117Q8IWD4 279 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-217ENST00000545738 ZNF513Q8N8E2 541 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-217ENST00000545738 ZNF557Q8N988 423 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-217ENST00000545738 CLDN23Q96B33 292 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 MS4A14Q96JA4 679 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 THAP10Q9P2Z0 257 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-217ENST00000545738 ERVW-1Q9UQF0 538 aa16.65■□□□□ 0.26
LIMS2-217ENST00000545738 SGK1O00141 431 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 STK25O00506 426 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 KDELR3O43731 214 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 ZNF821O75541 412 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-217ENST00000545738 HLA-EP13747 358 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 POLR2EP19388 210 aaKnown RBP16.64■□□□□ 0.25
LIMS2-217ENST00000545738 PRKCHP24723 683 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 ETF1P62495 437 aaKnown RBP16.64■□□□□ 0.25
LIMS2-217ENST00000545738 ECT2LQ008S8 904 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 ENPP2Q13822 863 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 DMC1Q14565 340 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 EIF4HQ15056 248 aaKnown RBP16.64■□□□□ 0.25
LIMS2-217ENST00000545738 SIX1Q15475 284 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-217ENST00000545738 SYT10Q6XYQ8 523 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 ADAT2Q7Z6V5 191 aaKnown RBP16.64■□□□□ 0.25
LIMS2-217ENST00000545738 LZTR1Q8N653 840 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-217ENST00000545738 OSBPL9Q96SU4 736 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 LGMNQ99538 433 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 MAK16Q9BXY0 300 aaKnown RBP16.64■□□□□ 0.25
LIMS2-217ENST00000545738 TMEM245Q9H330 911 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 MFSD1Q9H3U5 465 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 C10orf88Q9H8K7 445 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 CD248Q9HCU0 757 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 SNX12Q9UMY4 172 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 SIT1Q9Y3P8 196 aa16.64■□□□□ 0.25
LIMS2-217ENST00000545738 TTC34A8MYJ7 566 aa16.63■□□□□ 0.25
LIMS2-217ENST00000545738 SRCP12931 536 aa16.63■□□□□ 0.25
LIMS2-217ENST00000545738 SERPINB6P35237 376 aa16.63■□□□□ 0.25
LIMS2-217ENST00000545738 GARSP41250 739 aaKnown RBP16.63■□□□□ 0.25
LIMS2-217ENST00000545738 KCTD19Q17RG1 926 aaPredicted RBP16.63■□□□□ 0.25
LIMS2-217ENST00000545738 TMEM105Q8N8V8 129 aa16.63■□□□□ 0.25
LIMS2-217ENST00000545738 VOPP1Q96AW1 172 aa16.63■□□□□ 0.25
LIMS2-217ENST00000545738 C2orf49Q9BVC5 232 aaPredicted RBP16.63■□□□□ 0.25
LIMS2-217ENST00000545738 IPO11Q9UI26 975 aaKnown RBP16.63■□□□□ 0.25
LIMS2-217ENST00000545738 HS3ST2Q9Y278 367 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms