RNA–Protein interactions for RNA: ENST00000545595.6

CACNA2D4-217, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 1,615 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-217ENST00000545595 ANO4Q32M45 955 aa16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 RFWD3Q6PCD5 774 aa16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 RTL10Q7L3V2 364 aa16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 OTOP3Q7RTS5 596 aa16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 TMC7Q7Z402 723 aa16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 SRRM1Q8IYB3 904 aaKnown RBP16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 MRPL43Q8N983 215 aaKnown RBP16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 OR52K1Q8NGK4 314 aa16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 GSDMBQ8TAX9 411 aa16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 SPPL3Q8TCT6 385 aa16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 SLC44A1Q8WWI5 657 aa16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 MRRFQ96E11 262 aaKnown RBP16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 ZFRQ96KR1 1074 aaKnown RBP16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 KLHL5Q96PQ7 755 aa16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 SYBUQ9NX95 663 aa16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 ASB3Q9Y575 518 aa16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 MYLKQ15746 1914 aa16.02■□□□□ 0.16
CACNA2D4-217ENST00000545595 MIA3Q5JRA6 1907 aa16.02■□□□□ 0.15
CACNA2D4-217ENST00000545595 CHN1P15882 459 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 IFNAR2P48551 515 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 CRADDP78560 199 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 PARP15Q460N3 678 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 DENND1CQ8IV53 801 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 MZB1Q8WU39 189 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 WBP2Q969T9 261 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 ABHD8Q96I13 439 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 PRICKLE1Q96MT3 831 aaPredicted RBP16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 SAMD11Q96NU1 681 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 FCRL5Q96RD9 977 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 EMILIN2Q9BXX0 1053 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 RETREG1Q9H6L5 497 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 LRRC40Q9H9A6 602 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 GKN1Q9NS71 199 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 HELZP42694 1942 aaKnown RBP16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 PSMD3O43242 534 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 RAMP2O60895 175 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 USP12O75317 370 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 OLFM2O95897 454 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 PGAM1P18669 254 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 MSH2P43246 934 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 YBEYP58557 167 aaPredicted RBP16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 ERVFC1P60507 584 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 PRPSAP1Q14558 356 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 TMC8Q8IU68 726 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 CCNJLQ8IV13 435 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 ATXN2LQ8WWM7 1075 aaKnown RBP16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 GBF1Q92538 1859 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 CENPTQ96BT3 561 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 TCF25Q9BQ70 676 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 LRRC3Q9BY71 257 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 TLR9Q9NR96 1032 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 SMYD2Q9NRG4 433 aa16.01■□□□□ 0.15
CACNA2D4-217ENST00000545595 RBM22Q9NW64 420 aaKnown RBP eCLIP16.01■□□□□ 0.152e-6■■■■□ 25.8
CACNA2D4-217ENST00000545595 TMEM120BA0PK00 339 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 C2orf71A6NGG8 1288 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 FAM159BA6NKW6 160 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 SRRM3A6NNA2 597 aaPredicted RBP16■□□□□ 0.15
CACNA2D4-217ENST00000545595 CXorf49A8MYA2 514 aaPredicted RBP16■□□□□ 0.15
CACNA2D4-217ENST00000545595 H3BNC9 293 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 J3KR12 359 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 IRF1P10914 325 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 BRAFP15056 766 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 OR1E1P30953 314 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 MAGEA10P43363 369 aaPredicted RBP16■□□□□ 0.15
CACNA2D4-217ENST00000545595 TNK2Q07912 1038 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 SERINC3Q13530 473 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 HNRNPDQ14103 355 aaKnown RBP16■□□□□ 0.15
CACNA2D4-217ENST00000545595 POLD3Q15054 466 aaPredicted RBP16■□□□□ 0.15
CACNA2D4-217ENST00000545595 PABPC1LQ4VXU2 614 aaKnown RBP16■□□□□ 0.15
CACNA2D4-217ENST00000545595 RABGAP1LQ5R372 815 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 C9orf50Q5SZB4 431 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 CASC4Q6P4E1 433 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 TRMT10BQ6PF06 316 aaKnown RBP16■□□□□ 0.15
CACNA2D4-217ENST00000545595 CCDC149Q6ZUS6 474 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 CYS1Q717R9 158 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 CFAP52Q8N1V2 620 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 SPATA22Q8NHS9 363 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 POF1BQ8WVV4 589 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 PPP1R2P1Q96PQ5 205 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 SLC22A12Q96S37 553 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 NAT9Q9BTE0 207 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 SP110Q9HB58 689 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 ALG13Q9NP73 1137 aaKnown RBP16■□□□□ 0.15
CACNA2D4-217ENST00000545595 ENTPD7Q9NQZ7 604 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 UBP1Q9NZI7 540 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 SENP1Q9P0U3 644 aa16■□□□□ 0.15
CACNA2D4-217ENST00000545595 AGO1Q9UL18 857 aaKnown RBP16■□□□□ 0.15
CACNA2D4-217ENST00000545595 ANXA9O76027 345 aa15.99■□□□□ 0.15
CACNA2D4-217ENST00000545595 ALDH1A2O94788 518 aa15.99■□□□□ 0.15
CACNA2D4-217ENST00000545595 LRG1P02750 347 aa15.99■□□□□ 0.15
CACNA2D4-217ENST00000545595 C8AP07357 584 aa15.99■□□□□ 0.15
CACNA2D4-217ENST00000545595 MBL2P11226 248 aaPredicted RBP15.99■□□□□ 0.15
CACNA2D4-217ENST00000545595 KRT15P19012 456 aa15.99■□□□□ 0.15
CACNA2D4-217ENST00000545595 DNAJB1P25685 340 aa15.99■□□□□ 0.15
CACNA2D4-217ENST00000545595 ACVRL1P37023 503 aa15.99■□□□□ 0.15
CACNA2D4-217ENST00000545595 CRYMQ14894 314 aa15.99■□□□□ 0.15
CACNA2D4-217ENST00000545595 PLPP4Q5VZY2 271 aa15.99■□□□□ 0.15
CACNA2D4-217ENST00000545595 NAPEPLDQ6IQ20 393 aa15.99■□□□□ 0.15
CACNA2D4-217ENST00000545595 PDE12Q6L8Q7 609 aaKnown RBP15.99■□□□□ 0.15
CACNA2D4-217ENST00000545595 GAREM2Q75VX8 874 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms