RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 LIMK1P53667 647 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 TBX4P57082 545 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 BPIFB4P59827 614 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 YWHAZP63104 245 aaKnown RBP7.96□□□□□ -1.14
SNHG1-223ENST00000545440 STARD3Q14849 445 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 STX1AQ16623 288 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 GEN1Q17RS7 908 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 RSPO4Q2I0M5 234 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-223ENST00000545440 HSP90AA4PQ58FG1 418 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 FAM133BQ5BKY9 247 aaKnown RBP7.96□□□□□ -1.14
SNHG1-223ENST00000545440 SPDYCQ5MJ68 293 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 CDKAL1Q5VV42 579 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 DPY19L2P1Q6NXN4 242 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 ADAMTSL4Q6UY14 1074 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 DGLUCYQ7Z3D6 616 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 TAC4Q86UU9 113 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 FAM71AQ8IYT1 594 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 AHI1Q8N157 1196 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.96□□□□□ -1.14
SNHG1-223ENST00000545440 C12orf50Q8NA57 414 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-223ENST00000545440 HJURPQ8NCD3 748 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-223ENST00000545440 WFIKKN2Q8TEU8 576 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 IPO4Q8TEX9 1081 aaKnown RBP7.96□□□□□ -1.14
SNHG1-223ENST00000545440 CPLX3Q8WVH0 158 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 GATAD2BQ8WXI9 593 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 NKD1Q969G9 470 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 SLC39A13Q96H72 371 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 RHOVQ96L33 236 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 FCRL2Q96LA5 508 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-223ENST00000545440 CPXM1Q96SM3 734 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 ACOX2Q99424 681 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 DDX50Q9BQ39 737 aaKnown RBP7.96□□□□□ -1.14
SNHG1-223ENST00000545440 RTKNQ9BST9 563 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 ARRDC1-AS1Q9H2J1 176 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 POPDC2Q9HBU9 364 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 VPS45Q9NRW7 570 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 SAMSN1Q9NSI8 373 aaKnown RBP7.96□□□□□ -1.14
SNHG1-223ENST00000545440 ASNSD1Q9NWL6 643 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 CACNA2D2Q9NY47 1150 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 CALCOCO1Q9P1Z2 691 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 THAP10Q9P2Z0 257 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-223ENST00000545440 NAALADL1Q9UQQ1 740 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 CEP83Q9Y592 693 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 PCNX2A6NKB5 2137 aa7.96□□□□□ -1.14
SNHG1-223ENST00000545440 ANKRD36A6QL64 1941 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-223ENST00000545440 BCLAF3A2AJT9 711 aaKnown RBP7.95□□□□□ -1.14
SNHG1-223ENST00000545440 F8VZ95 297 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 FOXN3O00409 490 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-223ENST00000545440 PES1O00541 588 aaKnown RBP7.95□□□□□ -1.14
SNHG1-223ENST00000545440 CAPN9O14815 690 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 SLC30A4O14863 429 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 TIMM44O43615 452 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 ACSL4O60488 711 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 ZNF217O75362 1048 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 TRUB2O95900 331 aaKnown RBP7.95□□□□□ -1.14
SNHG1-223ENST00000545440 APOEP02649 317 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 TPM2P07951 284 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 UCHL3P15374 230 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 SLC6A4P31645 630 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 CDH5P33151 784 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-223ENST00000545440 HOXD12P35452 270 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 IL12RB1P42701 662 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 SNX16P57768 344 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 NRG1Q02297 640 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-223ENST00000545440 CREB5Q02930 508 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 KCNMA1Q12791 1236 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 MTA1Q13330 715 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 RAPGEF1Q13905 1077 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 MPP2Q14168 576 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 EXOSC6Q5RKV6 272 aaKnown RBP7.95□□□□□ -1.14
SNHG1-223ENST00000545440 CCDC183Q5T5S1 534 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 PIK3R6Q5UE93 754 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 KLHDC7AQ5VTJ3 777 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 SYPL2Q5VXT5 272 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 KIAA1211LQ6NV74 962 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 SLC36A4Q6YBV0 504 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 LPCAT2Q7L5N7 544 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 SLC47A2Q86VL8 602 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 ZDHHC17Q8IUH5 632 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 PASD1Q8IV76 773 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 C1orf131Q8NDD1 294 aaKnown RBP7.95□□□□□ -1.14
SNHG1-223ENST00000545440 TMA16Q96EY4 203 aaKnown RBP7.95□□□□□ -1.14
SNHG1-223ENST00000545440 PPP1R13BQ96KQ4 1090 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 MRGPRX1Q96LB2 322 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 PRICKLE1Q96MT3 831 aaPredicted RBP7.95□□□□□ -1.14
SNHG1-223ENST00000545440 SLC2A13Q96QE2 648 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 NAA15Q9BXJ9 866 aaKnown RBP7.95□□□□□ -1.14
SNHG1-223ENST00000545440 PLCB1Q9NQ66 1216 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 ANO10Q9NW15 660 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 ELOVL2Q9NXB9 296 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 ADAMTS1Q9UHI8 967 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 CLEC4EQ9ULY5 219 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 DAAM1Q9Y4D1 1078 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 FHOD1Q9Y613 1164 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 STON1Q9Y6Q2 735 aa7.95□□□□□ -1.14
SNHG1-223ENST00000545440 LAMA1P25391 3075 aa7.94□□□□□ -1.14
SNHG1-223ENST00000545440 AP5Z1O43299 807 aa7.94□□□□□ -1.14
SNHG1-223ENST00000545440 TSPAN3O60637 253 aa7.94□□□□□ -1.14
SNHG1-223ENST00000545440 DAB1O75553 588 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms