RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 FLRT1Q9NZU1 646 aa23.71■■□□□ 1.39
FOXA1-202ENST00000545425 ZCWPW2A0A1B0GU75 182 aa23.7■■□□□ 1.39
FOXA1-202ENST00000545425 ZNF195O14628 629 aa23.7■■□□□ 1.39
FOXA1-202ENST00000545425 DYNC1LI2O43237 492 aaPredicted RBP23.7■■□□□ 1.39
FOXA1-202ENST00000545425 TRIM13O60858 407 aa23.7■■□□□ 1.39
FOXA1-202ENST00000545425 C6orf222P0C671 652 aaPredicted RBP23.7■■□□□ 1.39
FOXA1-202ENST00000545425 ERVK-10P10266 1014 aa23.7■■□□□ 1.39
FOXA1-202ENST00000545425 NME3Q13232 169 aa23.7■■□□□ 1.39
FOXA1-202ENST00000545425 PDPK2PQ6A1A2 396 aa23.7■■□□□ 1.39
FOXA1-202ENST00000545425 SETD3Q86TU7 594 aaPredicted RBP23.7■■□□□ 1.39
FOXA1-202ENST00000545425 DNAAF3Q8N9W5 541 aa23.7■■□□□ 1.39
FOXA1-202ENST00000545425 SMG8Q8ND04 991 aaKnown RBP23.7■■□□□ 1.39
FOXA1-202ENST00000545425 PPP1R12CQ9BZL4 782 aa23.7■■□□□ 1.39
FOXA1-202ENST00000545425 KRT82Q9NSB4 513 aa23.7■■□□□ 1.39
FOXA1-202ENST00000545425 KLK14Q9P0G3 267 aa23.7■■□□□ 1.39
FOXA1-202ENST00000545425 SSX2IPQ9Y2D8 614 aa23.7■■□□□ 1.39
FOXA1-202ENST00000545425 A0A088AWK7 358 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 LTFP02788 710 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 CRABP2P29373 138 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 MLH1P40692 756 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 NUMBP49757 651 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 CDH17Q12864 832 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 MPP3Q13368 585 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 UBAP2LQ14157 1087 aaKnown RBP23.7■■□□□ 1.38
FOXA1-202ENST00000545425 CFAP157Q5JU67 520 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 SYPL2Q5VXT5 272 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 BSPRYQ5W0U4 402 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 PGM2L1Q6PCE3 622 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 EPGNQ6UW88 154 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 UBE2Q1Q7Z7E8 422 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 MCMBPQ9BTE3 642 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 ULBP1Q9BZM6 244 aa23.7■■□□□ 1.38
FOXA1-202ENST00000545425 SPATS2LQ9NUQ6 558 aaKnown RBP23.7■■□□□ 1.38
FOXA1-202ENST00000545425 COL4A4P53420 1690 aaPredicted RBP23.7■■□□□ 1.38
FOXA1-202ENST00000545425 A0A096LPK6 155 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 CACNG3O60359 315 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 LYPLA1O75608 230 aaPredicted RBP23.69■■□□□ 1.38
FOXA1-202ENST00000545425 IGHA2P01877 340 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 CXCR3P49682 368 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 DSG1Q02413 1049 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 ANO4Q32M45 955 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 MDH1BQ5I0G3 518 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 WSCD1Q658N2 575 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 FSTL4Q6MZW2 842 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 TAF2Q6P1X5 1199 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 DCLRE1AQ6PJP8 1040 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 FAM35AQ86V20 835 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 URGCPQ8TCY9 931 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 PTCD2Q8WV60 388 aaKnown RBP23.69■■□□□ 1.38
FOXA1-202ENST00000545425 FCRL3Q96P31 734 aaPredicted RBP23.69■■□□□ 1.38
FOXA1-202ENST00000545425 SYT15Q9BQS2 421 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 OSBPL2Q9H1P3 480 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 PDP2Q9P2J9 529 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 AAR2Q9Y312 384 aaKnown RBP23.69■■□□□ 1.38
FOXA1-202ENST00000545425 PDE4DIPQ5VU43 2346 aa23.69■■□□□ 1.38
FOXA1-202ENST00000545425 TNRC18O15417 2968 aaPredicted RBP23.69■■□□□ 1.38
FOXA1-202ENST00000545425 HSPA4LO95757 839 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 RPLP2P05387 115 aaKnown RBP23.68■■□□□ 1.38
FOXA1-202ENST00000545425 FYNP06241 537 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 PCSK1P29120 753 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 HOXC8P31273 242 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 KIRREL3Q8IZU9 778 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 TEKT5Q96M29 485 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 KCNK16Q96T55 309 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 RTKNQ9BST9 563 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 KIFC1Q9BW19 673 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 RNF39Q9H2S5 420 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 ZDHHC7Q9NXF8 308 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 VTI1BQ9UEU0 232 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 ARHGAP26Q9UNA1 814 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 AP1G2O75843 785 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 CABYRO75952 493 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 PAX7P23759 505 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 RPL9P32969 192 aaKnown RBP23.68■■□□□ 1.38
FOXA1-202ENST00000545425 CSRP3P50461 194 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 MAP3K7CLP57077 242 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 ITGA9Q13797 1035 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 PRPF38BQ5VTL8 546 aaKnown RBP23.68■■□□□ 1.38
FOXA1-202ENST00000545425 PM20D1Q6GTS8 502 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 TMEM154Q6P9G4 183 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 KCNMB4Q86W47 210 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 DTX3LQ8TDB6 740 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 SMARCD1Q96GM5 515 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 CNDP1Q96KN2 507 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 SENP8Q96LD8 212 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 GPR22Q99680 433 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 COLEC11Q9BWP8 271 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 TSPYL2Q9H2G4 693 aaPredicted RBP23.68■■□□□ 1.38
FOXA1-202ENST00000545425 NMRAL1Q9HBL8 299 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 S100A14Q9HCY8 104 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 BCAP29Q9UHQ4 241 aa23.68■■□□□ 1.38
FOXA1-202ENST00000545425 C17orf102A2RUQ5 167 aa23.67■■□□□ 1.38
FOXA1-202ENST00000545425 PTGESO14684 152 aa23.67■■□□□ 1.38
FOXA1-202ENST00000545425 TOP3BO95985 862 aaKnown RBP23.67■■□□□ 1.38
FOXA1-202ENST00000545425 CCND3P30281 292 aaPredicted RBP23.67■■□□□ 1.38
FOXA1-202ENST00000545425 PSEN1P49768 467 aa23.67■■□□□ 1.38
FOXA1-202ENST00000545425 PITX1P78337 314 aaPredicted RBP23.67■■□□□ 1.38
FOXA1-202ENST00000545425 IRX1P78414 480 aaPredicted RBP23.67■■□□□ 1.38
FOXA1-202ENST00000545425 ILF2Q12905 390 aaKnown RBP23.67■■□□□ 1.38
FOXA1-202ENST00000545425 TLK2Q86UE8 772 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms