RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 NOX5Q96PH1 765 aa11.83□□□□□ -0.52
TMEM258-208ENST00000545210 PREBQ9HCU5 417 aa11.83□□□□□ -0.52
TMEM258-208ENST00000545210 TJP2Q9UDY2 1190 aa11.83□□□□□ -0.52
TMEM258-208ENST00000545210 COQ4Q9Y3A0 265 aa11.83□□□□□ -0.52
TMEM258-208ENST00000545210 PTPN13Q12923 2485 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 A0A1W2PQU0 124 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 PMS2P1A4D2B8 440 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 NEMP2A6NFY4 417 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 C1QTNF3-AMACRE9PGA6 284 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 K7ELQ4 463 aaPredicted RBP11.82□□□□□ -0.52
TMEM258-208ENST00000545210 MCF2LO15068 1137 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 BNIP3LO60238 219 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 F13A1P00488 732 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 PAEPP09466 180 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 ZSCAN22P10073 491 aaPredicted RBP11.82□□□□□ -0.52
TMEM258-208ENST00000545210 EPB41P11171 864 aaKnown RBP11.82□□□□□ -0.52
TMEM258-208ENST00000545210 BRD2P25440 801 aaKnown RBP11.82□□□□□ -0.52
TMEM258-208ENST00000545210 RBMS1P29558 406 aaKnown RBP11.82□□□□□ -0.52
TMEM258-208ENST00000545210 DUSP3P51452 185 aaPredicted RBP11.82□□□□□ -0.52
TMEM258-208ENST00000545210 CLDN2P57739 230 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 CNGA2Q16280 664 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 ZNF284Q2VY69 593 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 EDRF1Q3B7T1 1238 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 PIP5KL1Q5T9C9 394 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 CCDC81Q6ZN84 652 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 CCAR2Q8N163 923 aaKnown RBP11.82□□□□□ -0.52
TMEM258-208ENST00000545210 SLC22A18ASQ8N1D0 253 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 BTN2A3PQ96KV6 586 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 DNAJC28Q9NX36 388 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 USP25Q9UHP3 1055 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 SLC25A13Q9UJS0 675 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 RCOR1Q9UKL0 485 aa11.82□□□□□ -0.52
TMEM258-208ENST00000545210 SCN8AQ9UQD0 1980 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 F5H5T6 163 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 K7ESM1 405 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 RNF225M0QZC1 329 aaPredicted RBP11.81□□□□□ -0.52
TMEM258-208ENST00000545210 SCAMP1O15126 338 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 CETN3O15182 167 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 ALOX15BO15296 676 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 ATP9BO43861 1147 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 LZTS3O60299 673 aaPredicted RBP11.81□□□□□ -0.52
TMEM258-208ENST00000545210 TBXAS1P24557 533 aaPredicted RBP11.81□□□□□ -0.52
TMEM258-208ENST00000545210 AKT2P31751 481 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 CSRP3P50461 194 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 PLK1P53350 603 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 SKOR1P84550 965 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 DNM1Q05193 864 aaKnown RBP11.81□□□□□ -0.52
TMEM258-208ENST00000545210 DPYDQ12882 1025 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 NFATC3Q12968 1075 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 DLG2Q15700 870 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 CDKN3Q16667 212 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 CXorf57Q6NSI4 855 aaKnown RBP11.81□□□□□ -0.52
TMEM258-208ENST00000545210 FOXR1Q6PIV2 292 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 IGF2-ASQ6U949 168 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 SMYD4Q8IYR2 804 aaPredicted RBP11.81□□□□□ -0.52
TMEM258-208ENST00000545210 ERCC4Q92889 916 aaPredicted RBP11.81□□□□□ -0.52
TMEM258-208ENST00000545210 CCDC97Q96F63 343 aaPredicted RBP11.81□□□□□ -0.52
TMEM258-208ENST00000545210 HSFY1Q96LI6 401 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 TRIM4Q9C037 500 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 USP29Q9HBJ7 922 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 ST7Q9NRC1 585 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 EVA1BQ9NVM1 165 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 CFAP45Q9UL16 551 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 HPSEQ9Y251 543 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 PCDHB4Q9Y5E5 795 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 ENTPD2Q9Y5L3 495 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 SPTA1P02549 2419 aa11.81□□□□□ -0.52
TMEM258-208ENST00000545210 DOCK4Q8N1I0 1966 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.8□□□□□ -0.52
TMEM258-208ENST00000545210 CPED1A4D0V7 1026 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 TCAF2A6NFQ2 919 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 CDRT15L2A8MXV6 281 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 KCNU1A8MYU2 1149 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 KPNA3O00505 521 aaPredicted RBP11.8□□□□□ -0.52
TMEM258-208ENST00000545210 CTSLP07711 333 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 HNRNPA2B1P22626 353 aaKnown RBP11.8□□□□□ -0.52
TMEM258-208ENST00000545210 CMA1P23946 247 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 PITX1P78337 314 aaPredicted RBP11.8□□□□□ -0.52
TMEM258-208ENST00000545210 CENPCQ03188 943 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 ZNF177Q13360 481 aaPredicted RBP11.8□□□□□ -0.52
TMEM258-208ENST00000545210 ZSCAN23Q3MJ62 389 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 ATL3Q6DD88 541 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 OR6B2Q6IFH4 312 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 ZCCHC8Q6NZY4 707 aaKnown RBP11.8□□□□□ -0.52
TMEM258-208ENST00000545210 NEK5Q6P3R8 708 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 GUSBP11Q6P575 273 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 CRTC1Q6UUV9 634 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 GCNT7Q6ZNI0 430 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 Q6ZSR6 202 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 PTAR1Q7Z6K3 402 aaPredicted RBP11.8□□□□□ -0.52
TMEM258-208ENST00000545210 ABI3BPQ7Z7G0 1075 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 HORMAD1Q86X24 394 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 EXD3Q8N9H8 876 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 OR52K2Q8NGK3 314 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 ARRDC3Q96B67 414 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 ALG14Q96F25 216 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 PRR11Q96HE9 360 aaPredicted RBP11.8□□□□□ -0.52
TMEM258-208ENST00000545210 PRMT1Q99873 361 aaKnown RBP11.8□□□□□ -0.52
TMEM258-208ENST00000545210 FEM1AQ9BSK4 669 aa11.8□□□□□ -0.52
TMEM258-208ENST00000545210 DUSP23Q9BVJ7 150 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms