RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 MMS22LQ6ZRQ5 1243 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 CCAR2Q8N163 923 aaKnown RBP16.69■□□□□ 0.26
DDX55-212ENST00000544738 EID2Q8N6I1 236 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 LMBRD1Q9NUN5 540 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 ITIH6Q6UXX5 1313 aa16.69■□□□□ 0.26
DDX55-212ENST00000544738 TMEM131Q92545 1883 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 A0A1B0GTQ1 180 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 M0QYT0 321 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 WISP1O95388 367 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 PNMA6AP0CW24 399 aaPredicted RBP16.68■□□□□ 0.26
DDX55-212ENST00000544738 UCHL3P15374 230 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 CYP11B1P15538 503 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 CDH5P33151 784 aaPredicted RBP16.68■□□□□ 0.26
DDX55-212ENST00000544738 SCNN1AP37088 669 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 PLK1P53350 603 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 KCNMA1Q12791 1236 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 NME3Q13232 169 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 C9orf64Q5T6V5 341 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 FBXL22Q6P050 247 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 FBXL19Q6PCT2 694 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 DHX40Q8IX18 779 aaKnown RBP16.68■□□□□ 0.26
DDX55-212ENST00000544738 APCDD1Q8J025 514 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 MSANTD4Q8NCY6 345 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 ENOX1Q8TC92 643 aaKnown RBP16.68■□□□□ 0.26
DDX55-212ENST00000544738 WBP1Q96G27 269 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 RPRD1AQ96P16 312 aaPredicted RBP16.68■□□□□ 0.26
DDX55-212ENST00000544738 ACE2Q9BYF1 805 aaPredicted RBP16.68■□□□□ 0.26
DDX55-212ENST00000544738 PABPC3Q9H361 631 aaKnown RBP16.68■□□□□ 0.26
DDX55-212ENST00000544738 MTG2Q9H4K7 406 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 CPNE5Q9HCH3 593 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 STAP1Q9ULZ2 295 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 PAXBP1Q9Y5B6 917 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 FHOD1Q9Y613 1164 aa16.68■□□□□ 0.26
DDX55-212ENST00000544738 SLC28A2O43868 658 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 SIN3BO75182 1162 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 LSM8O95777 96 aaKnown RBP16.67■□□□□ 0.26
DDX55-212ENST00000544738 F9P00740 461 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 TPM2P07951 284 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 C6P13671 934 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 CTSOP43234 321 aaPredicted RBP16.67■□□□□ 0.26
DDX55-212ENST00000544738 GABRB2P47870 512 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 ACADVLP49748 655 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 AUHQ13825 339 aaKnown RBP16.67■□□□□ 0.26
DDX55-212ENST00000544738 CST6Q15828 149 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 TBC1D25Q3MII6 688 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 BRMS1LQ5PSV4 323 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 ACBD5Q5T8D3 534 aaPredicted RBP16.67■□□□□ 0.26
DDX55-212ENST00000544738 BROXQ5VW32 411 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 SND1Q7KZF4 910 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDX55-212ENST00000544738 ERICH1Q86X53 443 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 GANCQ8TET4 914 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 C18orf8Q96DM3 657 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 GBP4Q96PP9 640 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 ELF4Q99607 663 aaPredicted RBP16.67■□□□□ 0.26
DDX55-212ENST00000544738 NAA15Q9BXJ9 866 aaKnown RBP16.67■□□□□ 0.26
DDX55-212ENST00000544738 STK33Q9BYT3 514 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 PLCB1Q9NQ66 1216 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 FBXL12Q9NXK8 326 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDX55-212ENST00000544738 SLCO3A1Q9UIG8 710 aa16.67■□□□□ 0.26
DDX55-212ENST00000544738 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.66■□□□□ 0.26
DDX55-212ENST00000544738 TTC34A8MYJ7 566 aa16.66■□□□□ 0.26
DDX55-212ENST00000544738 CLDN11O75508 207 aa16.66■□□□□ 0.26
DDX55-212ENST00000544738 KRT10P13645 584 aa16.66■□□□□ 0.26
DDX55-212ENST00000544738 PDGFRAP16234 1089 aa16.66■□□□□ 0.26
DDX55-212ENST00000544738 GLDCP23378 1020 aa16.66■□□□□ 0.26
DDX55-212ENST00000544738 ZNF177Q13360 481 aaPredicted RBP16.66■□□□□ 0.26
DDX55-212ENST00000544738 NT5C3BQ969T7 300 aa16.66■□□□□ 0.26
DDX55-212ENST00000544738 PGAP3Q96FM1 320 aaPredicted RBP16.66■□□□□ 0.26
DDX55-212ENST00000544738 RPL10LQ96L21 214 aaKnown RBP16.66■□□□□ 0.26
DDX55-212ENST00000544738 NPY6RQ99463 290 aa16.66■□□□□ 0.26
DDX55-212ENST00000544738 WDCPQ9H6R7 721 aa16.66■□□□□ 0.26
DDX55-212ENST00000544738 FZD4Q9ULV1 537 aa16.66■□□□□ 0.26
DDX55-212ENST00000544738 FAM47DPA6NHR8 397 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 VILLO15195 856 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 PAGE1O75459 146 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 ADH1BP00325 375 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 SLC8A1P32418 973 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 CXCR3P49682 368 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 VASPP50552 380 aaPredicted RBP16.65■□□□□ 0.26
DDX55-212ENST00000544738 TMPRSS3P57727 454 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 RNASE9P60153 205 aaKnown RBP16.65■□□□□ 0.26
DDX55-212ENST00000544738 SLC25A52Q3SY17 297 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 C5orf22Q49AR2 442 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 CIR1Q86X95 450 aaPredicted RBP16.65■□□□□ 0.26
DDX55-212ENST00000544738 ZNF677Q86XU0 584 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 MMAAQ8IVH4 418 aaKnown RBP16.65■□□□□ 0.26
DDX55-212ENST00000544738 ZNF248Q8NDW4 579 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 SAP25Q8TEE9 199 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 PTPRN2Q92932 1015 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 FAM129BQ96TA1 746 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 OMDQ99983 421 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 SIK2Q9H0K1 926 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 PIGVQ9NUD9 493 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 TAB2Q9NYJ8 693 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 ADAMTS1Q9UHI8 967 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 VANGL2Q9ULK5 521 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 TPX2Q9ULW0 747 aaKnown RBP16.65■□□□□ 0.26
DDX55-212ENST00000544738 CLCA2Q9UQC9 943 aa16.65■□□□□ 0.26
DDX55-212ENST00000544738 DAAM1Q9Y4D1 1078 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms