RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 RARAP10276 462 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 HLA-EP13747 358 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 NDST2P52849 883 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 POLD3Q15054 466 aaPredicted RBP18.3■□□□□ 0.52
TSFM-208ENST00000543727 ELF2Q15723 593 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 PPP6R3Q5H9R7 873 aaPredicted RBP18.3■□□□□ 0.52
TSFM-208ENST00000543727 IL31Q6EBC2 164 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 DSG4Q86SJ6 1040 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 FAM71BQ8TC56 605 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 CASKIN2Q8WXE0 1202 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 ARHGEF2Q92974 986 aaKnown RBP18.3■□□□□ 0.52
TSFM-208ENST00000543727 SIPA1Q96FS4 1042 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 RPL10LQ96L21 214 aaKnown RBP18.3■□□□□ 0.52
TSFM-208ENST00000543727 KCTD15Q96SI1 283 aaPredicted RBP18.3■□□□□ 0.52
TSFM-208ENST00000543727 TPSD1Q9BZJ3 242 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 MKRN2Q9H000 416 aaKnown RBP18.3■□□□□ 0.52
TSFM-208ENST00000543727 RSPH9Q9H1X1 276 aaPredicted RBP18.3■□□□□ 0.52
TSFM-208ENST00000543727 PRSS16Q9NQE7 514 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 GPATCH2LQ9NWQ4 482 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 USP36Q9P275 1121 aaKnown RBP18.3■□□□□ 0.52
TSFM-208ENST00000543727 DNAI1Q9UI46 699 aa18.3■□□□□ 0.52
TSFM-208ENST00000543727 VPS13AQ96RL7 3174 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 RALGAPA1Q6GYQ0 2036 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 BTNL10A8MVZ5 291 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 CBX4O00257 560 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 ZMPSTE24O75844 475 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 RHOBTB1O94844 696 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 ACADMP11310 421 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 OXTRP30559 389 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 STK19P49842 368 aaPredicted RBP18.29■□□□□ 0.52
TSFM-208ENST00000543727 SERPINH1P50454 418 aaKnown RBP18.29■□□□□ 0.52
TSFM-208ENST00000543727 DPYSQ14117 519 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 PDK2Q15119 407 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 CA9Q16790 459 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 SMTNL2Q2TAL5 461 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 MAP7D1Q3KQU3 841 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 TTC31Q49AM3 519 aaPredicted RBP18.29■□□□□ 0.52
TSFM-208ENST00000543727 C9orf64Q5T6V5 341 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 ZNF776Q68DI1 518 aaPredicted RBP18.29■□□□□ 0.52
TSFM-208ENST00000543727 VSIG1Q86XK7 387 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 TMEM139Q8IV31 216 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 MAP7D3Q8IWC1 876 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 SPC24Q8NBT2 197 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 CCDC112Q8NEF3 446 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 OR7D4Q8NG98 312 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 FRS2Q8WU20 508 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 MAGEB5Q9BZ81 275 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 NDFIP2Q9NV92 336 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 SLCO3A1Q9UIG8 710 aa18.29■□□□□ 0.52
TSFM-208ENST00000543727 FARP1Q9Y4F1 1045 aaPredicted RBP18.29■□□□□ 0.52
TSFM-208ENST00000543727 MYO15AQ9UKN7 3530 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 TTC34A8MYJ7 566 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 ZNF487B1APH4 448 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 KDELR3O43731 214 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 SIN3BO75182 1162 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 SRCP12931 536 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 GOT1P17174 413 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 SSR1P43307 286 aaKnown RBP18.28■□□□□ 0.52
TSFM-208ENST00000543727 MESDQ14696 234 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 KCNT1Q5JUK3 1230 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 LRRC38Q5VT99 294 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 DAB2IPQ5VWQ8 1189 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 KIAA1324Q6UXG2 1013 aaKnown RBP18.28■□□□□ 0.52
TSFM-208ENST00000543727 PRR23BQ6ZRT6 265 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 PLPP6Q8IY26 295 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 ATP11CQ8NB49 1132 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 HSPH1Q92598 858 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 PTPRN2Q92932 1015 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 ISG20Q96AZ6 181 aaKnown RBP18.28■□□□□ 0.52
TSFM-208ENST00000543727 ZNF670Q9BS34 389 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 SPON2Q9BUD6 331 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 GRPEL1Q9HAV7 217 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 ITM2CQ9NQX7 267 aa18.28■□□□□ 0.52
TSFM-208ENST00000543727 CWC15Q9P013 229 aaKnown RBP18.28■□□□□ 0.52
TSFM-208ENST00000543727 GOLGA6L3A6NEY3 463 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 ARHGAP42A6NI28 874 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 SNAP91O60641 907 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 LRP3O75074 770 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 ADH1BP00325 375 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 DNTTP04053 509 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 TCF4P15884 667 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 ERCC2P18074 760 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 SERPINB6P35237 376 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 DPP6P42658 865 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 ARF5P84085 180 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 KRT81Q14533 505 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 DLG2Q15700 870 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 ACCSLQ4AC99 568 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 USP30Q70CQ3 517 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 KBTBD6Q86V97 674 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 PCDH20Q8N6Y1 951 aaKnown RBP18.27■□□□□ 0.52
TSFM-208ENST00000543727 ZNF366Q8N895 744 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 OR8D1Q8WZ84 308 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 TSC1Q92574 1164 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 PHOX2BQ99453 314 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 PCED1AQ9H1Q7 454 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 NOL6Q9H6R4 1146 aaKnown RBP18.27■□□□□ 0.52
TSFM-208ENST00000543727 LRRC19Q9H756 370 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 PCDH18Q9HCL0 1135 aa18.27■□□□□ 0.52
TSFM-208ENST00000543727 GMEB2Q9UKD1 530 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms