RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 STK33Q9BYT3 514 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 DYRK4Q9NR20 520 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 OR51B4Q9Y5P0 310 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 CABIN1Q9Y6J0 2220 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 DSPP15924 2871 aaKnown RBP13.46□□□□□ -0.25
RTN3-213ENST00000543552 PLRG1O43660 514 aaKnown RBP13.46□□□□□ -0.25
RTN3-213ENST00000543552 ADCY5O95622 1261 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 ITGAVP06756 1048 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 CDK4P11802 303 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 VAV1P15498 845 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 DRD3P35462 400 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 GGCXP38435 758 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 OVGP1Q12889 678 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 SETMARQ53H47 684 aaPredicted RBP13.46□□□□□ -0.25
RTN3-213ENST00000543552 OTUD1Q5VV17 481 aaPredicted RBP13.46□□□□□ -0.25
RTN3-213ENST00000543552 TAF3Q5VWG9 929 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 ZNF783Q6ZMS7 281 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 Q6ZVU0 165 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 ARCQ7LC44 396 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 SLCO6A1Q86UG4 719 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 IQCHQ86VS3 1027 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 TRIM69Q86WT6 500 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 XYLT1Q86Y38 959 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 ATP11CQ8NB49 1132 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 PIP4K2CQ8TBX8 421 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 FAM131CQ96AQ9 280 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 TBCBQ99426 244 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 NAA15Q9BXJ9 866 aaKnown RBP13.46□□□□□ -0.25
RTN3-213ENST00000543552 ERVMER34-1Q9H9K5 563 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 PREBQ9HCU5 417 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 PPM1HQ9ULR3 514 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 BTBD3Q9Y2F9 522 aa13.46□□□□□ -0.25
RTN3-213ENST00000543552 PLXNA2O75051 1894 aa13.46□□□□□ -0.26
RTN3-213ENST00000543552 LAMA5O15230 3695 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 TMEM131Q92545 1883 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 GOLGA8CPA6NN73 597 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 C10orf142B7Z368 130 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 GOLGA8SH3BPF8 625 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 TLR4O00206 839 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 KCNK3O14649 394 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 BNIP3LO60238 219 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 DKK1O94907 266 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 PRNPP04156 253 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 ATXN1LP0C7T5 689 aaKnown RBP13.45□□□□□ -0.26
RTN3-213ENST00000543552 OR1E1P30953 314 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 ANP32AP39687 249 aaKnown RBP13.45□□□□□ -0.26
RTN3-213ENST00000543552 RECQLP46063 649 aaPredicted RBP13.45□□□□□ -0.26
RTN3-213ENST00000543552 NUMBP49757 651 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 IRAK1P51617 712 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 IL9RQ01113 521 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 SCAPQ12770 1279 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 CNTN1Q12860 1018 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 STAT4Q14765 748 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 FKBP15Q5T1M5 1219 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 RETSATQ6NUM9 610 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 TMPRSS7Q7RTY8 843 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 C14orf80Q86SX3 495 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 NOP9Q86U38 636 aaKnown RBP13.45□□□□□ -0.26
RTN3-213ENST00000543552 PROSER1Q86XN7 944 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 MFSD2AQ8NA29 543 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 ANKRD20A12PQ8NF67 263 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 EPS8L1Q8TE68 723 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 PPP1R16AQ96I34 528 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 HAPLN3Q96S86 360 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 CCDC86Q9H6F5 360 aaKnown RBP13.45□□□□□ -0.26
RTN3-213ENST00000543552 SAMSN1Q9NSI8 373 aaKnown RBP13.45□□□□□ -0.26
RTN3-213ENST00000543552 TOR4AQ9NXH8 423 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 VPS51Q9UID3 782 aa13.45□□□□□ -0.26
RTN3-213ENST00000543552 COL5A1P20908 1838 aaPredicted RBP13.44□□□□□ -0.26
RTN3-213ENST00000543552 IGLV3-10A0A075B6K4 115 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 A0A1W2PR77 199 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 ILVBLA1L0T0 632 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 DRGXA6NNA5 263 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 E9PAM4 449 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 PRAMEF26H0Y7S4 382 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 KPNA3O00505 521 aaPredicted RBP13.44□□□□□ -0.26
RTN3-213ENST00000543552 RNGTTO60942 597 aaKnown RBP13.44□□□□□ -0.26
RTN3-213ENST00000543552 RTN2O75298 545 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 CNTN5O94779 1100 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 SRCP12931 536 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 ETFBP38117 255 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 NXPH1P58417 271 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 PPP2CBP62714 309 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 PPP2CAP67775 309 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 NOMO3P69849 1222 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 KCNMA1Q12791 1236 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 ARL13BQ3SXY8 428 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 ALFQ53S48 1182 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 KCNT1Q5JUK3 1230 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 AGBL4Q5VU57 503 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 NAA35Q5VZE5 725 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 DPY19L2P1Q6NXN4 242 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 NEK5Q6P3R8 708 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 TRIM72Q6ZMU5 477 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 TFAP2DQ7Z6R9 452 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 OR52K2Q8NGK3 314 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 ENOX1Q8TC92 643 aaKnown RBP13.44□□□□□ -0.26
RTN3-213ENST00000543552 ZYG11BQ9C0D3 744 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 RETREG1Q9H6L5 497 aa13.44□□□□□ -0.26
RTN3-213ENST00000543552 EBF2Q9HAK2 575 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms