RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 HESX1Q9UBX0 185 aa12.77□□□□□ -0.37
SMCR5-201ENST00000543475 EBF1Q9UH73 591 aa12.77□□□□□ -0.37
SMCR5-201ENST00000543475 MID2Q9UJV3 735 aa12.77□□□□□ -0.37
SMCR5-201ENST00000543475 AP4E1Q9UPM8 1137 aa12.77□□□□□ -0.37
SMCR5-201ENST00000543475 SLC8A2Q9UPR5 921 aa12.77□□□□□ -0.37
SMCR5-201ENST00000543475 HES2Q9Y543 173 aa12.77□□□□□ -0.37
SMCR5-201ENST00000543475 KDM4FA0A1W2PPD8 638 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 RNF103O00237 685 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 MCF2P10911 925 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 PORP16435 677 aaPredicted RBP12.76□□□□□ -0.37
SMCR5-201ENST00000543475 PSMB4P28070 264 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 HK2P52789 917 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 SLC6A3Q01959 620 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 TARBP2Q15633 366 aaKnown RBP12.76□□□□□ -0.37
SMCR5-201ENST00000543475 ATF7IP2Q5U623 682 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 LCLAT1Q6UWP7 414 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 CLEC14AQ86T13 490 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 PCDH20Q8N6Y1 951 aaKnown RBP12.76□□□□□ -0.37
SMCR5-201ENST00000543475 C12orf29Q8N999 325 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 PPWD1Q96BP3 646 aaKnown RBP12.76□□□□□ -0.37
SMCR5-201ENST00000543475 ISOC1Q96CN7 298 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 SLC29A1Q99808 456 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 ACE2Q9BYF1 805 aaPredicted RBP12.76□□□□□ -0.37
SMCR5-201ENST00000543475 TASP1Q9H6P5 420 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 CYP3A43Q9HB55 503 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 VTI1BQ9UEU0 232 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 ZDHHC2Q9UIJ5 367 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 COPG1Q9Y678 874 aaKnown RBP12.76□□□□□ -0.37
SMCR5-201ENST00000543475 THSD7AQ9UPZ6 1657 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 TCAF2A6NFQ2 919 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 TK2O00142 265 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 MAFO75444 373 aaPredicted RBP12.76□□□□□ -0.37
SMCR5-201ENST00000543475 BMP10O95393 424 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 ATXN1P54253 815 aaKnown RBP12.76□□□□□ -0.37
SMCR5-201ENST00000543475 NAGLUP54802 743 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 PSME3P61289 254 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 PRAMEP78395 509 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 GOLGA7BQ2TAP0 167 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 FKBP1CQ5VVH2 108 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 LIPMQ5VYY2 423 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 NCBP2-AS2Q69YL0 99 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 PMF1Q6P1K2 205 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 FAM83AQ86UY5 434 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 HERC6Q8IVU3 1022 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 FIBCD1Q8N539 461 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 FAM47BQ8NA70 645 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 TBC1D23Q9NUY8 699 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 EP400Q96L91 3159 aa12.76□□□□□ -0.37
SMCR5-201ENST00000543475 COL11A1P12107 1806 aaPredicted RBP12.76□□□□□ -0.37
SMCR5-201ENST00000543475 C9IYK1 514 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 SLCO1B7G3V0H7 640 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 INO80B-WBP1J3KQ70 363 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 B4GALT5O43286 388 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 IL18RAPO95256 599 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 JUNP05412 331 aaKnown RBP12.75□□□□□ -0.37
SMCR5-201ENST00000543475 C8BP07358 591 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 PFKMP08237 780 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 TFPTP0C1Z6 253 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 RHDQ02161 417 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 EEF1DP3Q658K8 133 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 ELMSAN1Q6PJG2 1045 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 LRRC71Q8N4P6 559 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMCR5-201ENST00000543475 NETO2Q8NC67 525 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 RSPH1Q8WYR4 309 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 C12orf43Q96C57 262 aaKnown RBP12.75□□□□□ -0.37
SMCR5-201ENST00000543475 VPS50Q96JG6 964 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 NOL11Q9H8H0 719 aaKnown RBP12.75□□□□□ -0.37
SMCR5-201ENST00000543475 MRPL40Q9NQ50 206 aaKnown RBP12.75□□□□□ -0.37
SMCR5-201ENST00000543475 SUCOQ9UBS9 1254 aaKnown RBP12.75□□□□□ -0.37
SMCR5-201ENST00000543475 BARX2Q9UMQ3 279 aaPredicted RBP12.75□□□□□ -0.37
SMCR5-201ENST00000543475 HACD1B0YJ81 288 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 PLOD2O00469 737 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 HTRA2O43464 458 aaPredicted RBP12.75□□□□□ -0.37
SMCR5-201ENST00000543475 APOA4P06727 396 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 STAT5BP51692 787 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 SLC5A3P53794 718 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 ANKDD1AQ495B1 522 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 IER5Q5VY09 327 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 JADE1Q6IE81 842 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 ZBTB49Q6ZSB9 765 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 GPR180Q86V85 440 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 LZTR1Q8N653 840 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMCR5-201ENST00000543475 HPDLQ96IR7 371 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 SCYL1Q96KG9 808 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 TSNARE1Q96NA8 513 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 KCTD15Q96SI1 283 aaPredicted RBP12.75□□□□□ -0.37
SMCR5-201ENST00000543475 ANKRD60Q9BZ19 345 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 PAIP1Q9H074 479 aaKnown RBP12.75□□□□□ -0.37
SMCR5-201ENST00000543475 LRRC40Q9H9A6 602 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 PFDN4Q9NQP4 134 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 PICK1Q9NRD5 415 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 FAM49BQ9NUQ9 324 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 CLEC11AQ9Y240 323 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 A0A087WXM4 84 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 KCNU1A8MYU2 1149 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 GOT1P17174 413 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 SAT1P21673 171 aa12.75□□□□□ -0.37
SMCR5-201ENST00000543475 RPL10P27635 214 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms