RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 RNASEH2AO75792 299 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ZMPSTE24O75844 475 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SRCP12931 536 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 GOT1P17174 413 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 C5AR1P21730 350 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 RFC1P35251 1148 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ADRA1BP35368 520 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PTPN9P43378 593 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PSMD8P48556 350 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 AFF3P51826 1226 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ATP11AP98196 1134 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NRG1Q02297 640 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ZNF252P-AS1Q0IIN9 211 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 IQCB1Q15051 598 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 KIF19Q2TAC6 998 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 HLA-BQ31612 363 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NCEH1Q6PIU2 408 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 DBX2Q6ZNG2 339 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 MON1BQ7L1V2 547 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 HDDC3Q8N4P3 179 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PCMTD1Q96MG8 357 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ADAM22Q9P0K1 906 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PPARGC1AQ9UBK2 798 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 VPS51Q9UID3 782 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NEU3Q9UQ49 428 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NCKAP1Q9Y2A7 1128 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ANKRD11Q6UB99 2663 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ILVBLA1L0T0 632 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SIGLEC16A6NMB1 481 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 FAM72CH0Y354 149 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 K7ERQ8 282 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 RNF103O00237 685 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 MCF2LO15068 1137 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SRGAP2O75044 1071 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CBFA2T3O75081 653 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 FSBPO95073 299 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TOP3BO95985 862 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ADH1BP00325 375 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 IL1BP01584 269 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 RHOCP08134 193 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ZNF883P0CG24 379 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 KRT3P12035 628 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 GLDCP23378 1020 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NNMTP40261 264 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NSFP46459 744 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ADPRHP54922 357 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 HDAC4P56524 1084 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 C1QBPQ07021 282 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SFSWAPQ12872 951 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 FAM72AQ5TYM5 149 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 KIAA0895LQ68EN5 471 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 FAM72DQ6L9T8 149 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CAVIN1Q6NZI2 390 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 WDR59Q6PJI9 974 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 LRRC31Q6UY01 552 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 STRADAQ7RTN6 431 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TFAP2DQ7Z6R9 452 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NLRP14Q86W24 1093 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 FAM72BQ86X60 149 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 OR2T34Q8NGX1 318 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NAP1L5Q96NT1 182 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CAMK1GQ96NX5 476 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 OMDQ99983 421 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NAT10Q9H0A0 1025 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 MUC3BQ9H195 1237 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 OSBPL2Q9H1P3 480 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 NDFIP2Q9NV92 336 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SLC25A13Q9UJS0 675 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ANGPTL2Q9UKU9 493 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 FNDC3AQ9Y2H6 1198 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 TMEM131Q92545 1883 aa13.44□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SPAARA0A1B0GVQ0 90 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 A0A1W2PPC4 97 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PLK4O00444 970 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 WNT9AO14904 365 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ALOX15BO15296 676 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SH3BP5O60239 455 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CD160O95971 181 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CALB1P05937 261 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CTSLP07711 333 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SDC4P31431 198 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CTSKP43235 329 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 GRIA4P48058 902 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CCR5P51681 352 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CNTN1Q12860 1018 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CDO1Q16878 200 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 C6orf118Q5T5N4 469 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 LAYNQ6UX15 382 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ZNF783Q6ZMS7 281 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 Q6ZVU0 165 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 CCDC185Q8N715 623 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 DCAF4L2Q8NA75 395 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 C3orf20Q8ND61 904 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 OR7D4Q8NG98 312 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 OR2A12Q8NGT7 310 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 GANCQ8TET4 914 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 FAM172AQ8WUF8 416 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 OR8D1Q8WZ84 308 aa13.43□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SNX19Q92543 992 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms