RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	GYS2	P54840	703 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	MAP3K7CL	P57077	242 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	MRPS21	P82921	87 aa	Known RBP	6.68	□□□□□ -1.34
CIT-213	ENST00000543324	LRRC63	Q05C16	580 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	MORC3	Q14149	939 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	HSP90B2P	Q58FF3	399 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	DNAJC21	Q5F1R6	531 aa	Known RBP	6.68	□□□□□ -1.34
CIT-213	ENST00000543324	LY6G5C	Q5SRR4	150 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	ANKRD40	Q6AI12	368 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	PM20D1	Q6GTS8	502 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	TTI2	Q6NXR4	508 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	FAM114A1	Q8IWE2	563 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	BBS7	Q8IWZ6	715 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	SCML4	Q8N228	414 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	TTC39C	Q8N584	583 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	ALLC	Q8N6M5	410 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	TXNDC5	Q8NBS9	432 aa	Known RBP	6.68	□□□□□ -1.34
CIT-213	ENST00000543324	RBBP8NL	Q8NC74	664 aa	Predicted RBP	6.68	□□□□□ -1.34
CIT-213	ENST00000543324	GALNT11	Q8NCW6	608 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	LMO3	Q8TAP4	145 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	KCNV2	Q8TDN2	545 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	CCDC47	Q96A33	483 aa	Known RBP	6.68	□□□□□ -1.34
CIT-213	ENST00000543324	CYFIP2	Q96F07	1278 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	WDR24	Q96S15	920 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	DUSP16	Q9BY84	665 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	IMPG2	Q9BZV3	1241 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	TLR8	Q9NR97	1041 aa	Known RBP	6.68	□□□□□ -1.34
CIT-213	ENST00000543324	SPHK2	Q9NRA0	654 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	CISH	Q9NSE2	258 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	RMND1	Q9NWS8	449 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	RAB20	Q9NX57	234 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	CLIC5	Q9NZA1	410 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	CHORDC1	Q9UHD1	332 aa	Predicted RBP	6.68	□□□□□ -1.34
CIT-213	ENST00000543324	TUBD1	Q9UJT1	453 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	FBXO10	Q9UK96	956 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	VPS4A	Q9UN37	437 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	ENTPD4	Q9Y227	616 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	STARD13	Q9Y3M8	1113 aa		6.68	□□□□□ -1.34
CIT-213	ENST00000543324	PLXNA2	O75051	1894 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324		A0A1B0GVT2	93 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324		A0A1W2PQH9	124 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	TRIM49B	A6NDI0	452 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324		A6NNZ2	444 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	6.67	□□□□□ -1.34
CIT-213	ENST00000543324	SCAMP3	O14828	347 aa	Known RBP	6.67	□□□□□ -1.34
CIT-213	ENST00000543324	USP12	O75317	370 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	TULP3	O75386	442 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	STC2	O76061	302 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	CLSTN1	O94985	981 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	SIX3	O95343	332 aa	Predicted RBP	6.67	□□□□□ -1.34
CIT-213	ENST00000543324	TBX18	O95935	607 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	MT-CO3	P00414	261 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	SERPINC1	P01008	464 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	LDLR	P01130	860 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	PENK	P01210	267 aa	Predicted RBP	6.67	□□□□□ -1.34
CIT-213	ENST00000543324	KLKB1	P03952	638 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	CCDC172	P0C7W6	258 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	ZNF18	P17022	549 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	GABRG2	P18507	467 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	ACO1	P21399	889 aa	Known RBP	6.67	□□□□□ -1.34
CIT-213	ENST00000543324	ADORA2B	P29275	332 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	GRIA2	P42262	883 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	TNFRSF4	P43489	277 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	SLC6A11	P48066	632 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	MARS	P56192	900 aa	Known RBP	6.67	□□□□□ -1.34
CIT-213	ENST00000543324	FKBP3	Q00688	224 aa	Known RBP	6.67	□□□□□ -1.34
CIT-213	ENST00000543324	IFRD2	Q12894	506 aa	Predicted RBP	6.67	□□□□□ -1.34
CIT-213	ENST00000543324	KCNAB2	Q13303	367 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	ENPP2	Q13822	863 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	CASP8	Q14790	479 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	KIF19	Q2TAC6	998 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	TUBB8	Q3ZCM7	444 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	MAP9	Q49MG5	647 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	SPECC1L	Q69YQ0	1117 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	TMEM25	Q86YD3	366 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	MIB1	Q86YT6	1006 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	TERB1	Q8NA31	727 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	ENOX1	Q8TC92	643 aa	Known RBP	6.67	□□□□□ -1.34
CIT-213	ENST00000543324	EEF2KMT	Q96G04	330 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	PNKP	Q96T60	521 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	GABRG3	Q99928	467 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	ZSWIM1	Q9BR11	485 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	MED10	Q9BTT4	135 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	ADAMTS1	Q9UHI8	967 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	SNX11	Q9Y5W9	270 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324	ITIH6	Q6UXX5	1313 aa		6.67	□□□□□ -1.34
CIT-213	ENST00000543324		A0A1W2PQF6	199 aa		6.66	□□□□□ -1.34
CIT-213	ENST00000543324	TARSL2	A2RTX5	802 aa	Known RBP	6.66	□□□□□ -1.34
CIT-213	ENST00000543324	CDRT15L2	A8MXV6	281 aa		6.66	□□□□□ -1.34
CIT-213	ENST00000543324	PPP1R3G	B7ZBB8	358 aa		6.66	□□□□□ -1.34
CIT-213	ENST00000543324	TULP1	O00294	542 aa	Predicted RBP	6.66	□□□□□ -1.34
CIT-213	ENST00000543324		O00370	1275 aa		6.66	□□□□□ -1.34
CIT-213	ENST00000543324	XPO1	O14980	1071 aa	Known RBP	6.66	□□□□□ -1.34
CIT-213	ENST00000543324	TRIM24	O15164	1050 aa		6.66	□□□□□ -1.34
CIT-213	ENST00000543324	CETN3	O15182	167 aa		6.66	□□□□□ -1.34
CIT-213	ENST00000543324	KIF5C	O60282	957 aa		6.66	□□□□□ -1.34
CIT-213	ENST00000543324	ZNF217	O75362	1048 aa		6.66	□□□□□ -1.34
CIT-213	ENST00000543324	KLF8	O95600	359 aa	Predicted RBP	6.66	□□□□□ -1.34
CIT-213	ENST00000543324	APOD	P05090	189 aa		6.66	□□□□□ -1.34
CIT-213	ENST00000543324	CISD3	P0C7P0	127 aa		6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms