RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 NOS1APO75052 506 aaPredicted RBP19.64■□□□□ 0.74
HDAC4-215ENST00000543185 CCNE2O96020 404 aa19.64■□□□□ 0.74
HDAC4-215ENST00000543185 ASS1P00966 412 aaKnown RBP19.64■□□□□ 0.74
HDAC4-215ENST00000543185 ANPEPP15144 967 aa19.64■□□□□ 0.74
HDAC4-215ENST00000543185 ZNF7P17097 686 aaPredicted RBP19.64■□□□□ 0.74
HDAC4-215ENST00000543185 ZC2HC1CQ53FD0 456 aaPredicted RBP19.64■□□□□ 0.74
HDAC4-215ENST00000543185 CKAP2Q8WWK9 683 aa19.64■□□□□ 0.74
HDAC4-215ENST00000543185 CRYL1Q9Y2S2 319 aa19.64■□□□□ 0.74
HDAC4-215ENST00000543185 APOC1P02654 83 aa19.64■□□□□ 0.74
HDAC4-215ENST00000543185 ERICH5Q6P6B1 374 aa19.64■□□□□ 0.74
HDAC4-215ENST00000543185 SLC44A5Q8NCS7 719 aa19.64■□□□□ 0.74
HDAC4-215ENST00000543185 ANGPT4Q9Y264 503 aa19.64■□□□□ 0.74
HDAC4-215ENST00000543185 MAGI3Q5TCQ9 1506 aa19.64■□□□□ 0.74
HDAC4-215ENST00000543185 OGTO15294 1046 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 HOXC6P09630 235 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 MKRN4PQ13434 485 aaPredicted RBP19.64■□□□□ 0.73
HDAC4-215ENST00000543185 MXRA8Q9BRK3 442 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 SEC22BO75396 215 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 TGDSO95455 350 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 TTI2Q6NXR4 508 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 SPAG16Q8N0X2 631 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 ZSCAN18Q8TBC5 510 aaPredicted RBP19.64■□□□□ 0.73
HDAC4-215ENST00000543185 MTIF3Q9H2K0 278 aaKnown RBP19.64■□□□□ 0.73
HDAC4-215ENST00000543185 PNPLA8Q9NP80 782 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 LRRC4BQ9NT99 713 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 LEF1Q9UJU2 399 aaPredicted RBP19.64■□□□□ 0.73
HDAC4-215ENST00000543185 UGT2B11O75310 529 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 S100A3P33764 101 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 GRIA3P42263 894 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 GCLCP48506 637 aaPredicted RBP19.64■□□□□ 0.73
HDAC4-215ENST00000543185 ARHGEF33A8MVX0 844 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 SNRPB2P08579 225 aaKnown RBP19.64■□□□□ 0.73
HDAC4-215ENST00000543185 RPTNQ6XPR3 784 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 KATNAL2Q8IYT4 538 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 SEMA4AQ9H3S1 761 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 HIST1H2ABP04908 130 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 RPL10AP62906 217 aaKnown RBP19.64■□□□□ 0.73
HDAC4-215ENST00000543185 ZNF662Q6ZS27 426 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 HIST3H2AQ7L7L0 130 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 ZNF614Q8N883 585 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 HIST1H2ACQ93077 130 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.64■□□□□ 0.734e-7■■■■■ 41
HDAC4-215ENST00000543185 ADGRB3O60242 1522 aa19.64■□□□□ 0.73
HDAC4-215ENST00000543185 FAM196BA6NMK8 535 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 IGKV5-2P06315 115 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 SCN1BQ07699 218 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 SKIV2LQ15477 1246 aaKnown RBP19.63■□□□□ 0.73
HDAC4-215ENST00000543185 TAF5Q15542 800 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 USP7Q93009 1102 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 CLCC1Q96S66 551 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 ABATP80404 500 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 HKDC1Q2TB90 917 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 ATP13A5Q4VNC0 1218 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 APOC4-APOC2K7ER74 178 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 MPZL2O60487 215 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 APOC2P02655 101 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 THRBP10828 461 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 ELK3P41970 407 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 SLC5A9Q2M3M2 681 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.63■□□□□ 0.73
HDAC4-215ENST00000543185 UMODL1Q5DID0 1318 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 A0A096LPK6 155 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 IDH2P48735 452 aaKnown RBP19.63■□□□□ 0.73
HDAC4-215ENST00000543185 CYP2R1Q6VVX0 501 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 HELQQ8TDG4 1101 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 ACOX2Q99424 681 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 MGAT4AQ9UM21 535 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 DHRS12A0PJE2 317 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 AGAP11Q8TF27 550 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 SLC9A8Q9Y2E8 581 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 MROH2AA6NES4 1674 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 REM1O75628 298 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 CBX6O95503 412 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 ITGB6P18564 788 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 PEX5LQ8IYB4 626 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 OFCC1Q8IZS5 231 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 HTR3CQ8WXA8 447 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 FBXO44Q9H4M3 255 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 DDI2Q5TDH0 399 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 NSUN4Q96CB9 384 aaKnown RBP19.63■□□□□ 0.73
HDAC4-215ENST00000543185 CGRRF1Q99675 332 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 NARFQ9UHQ1 456 aa19.63■□□□□ 0.73
HDAC4-215ENST00000543185 OR14I1A6ND48 311 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 ITGB3P05106 788 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 PPIBP23284 216 aaKnown RBP19.62■□□□□ 0.73
HDAC4-215ENST00000543185 PRR23CQ6ZRP0 262 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 TMCO6Q96DC7 493 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 TCF12Q99081 682 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 SNX6Q9UNH7 406 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 METTL6Q8TCB7 284 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 RHOBTB2Q9BYZ6 727 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 HALP42357 657 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 SNX7Q9UNH6 387 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 PTPN3P26045 913 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 GALNT3Q14435 633 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 TRMT13Q9NUP7 481 aaKnown RBP19.62■□□□□ 0.73
HDAC4-215ENST00000543185 STOX2Q9P2F5 926 aaPredicted RBP19.62■□□□□ 0.73
HDAC4-215ENST00000543185 TAF6LQ9Y6J9 622 aa19.62■□□□□ 0.73
HDAC4-215ENST00000543185 CDC40O60508 579 aaKnown RBP eCLIP19.62■□□□□ 0.73
HDAC4-215ENST00000543185 NTSP30990 170 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms