RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 PRKAR2AP13861 404 aaKnown RBP13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 CALB2P22676 271 aa13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 ARHGAP8P85298 464 aa13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 ITGA9Q13797 1035 aa13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 SLC39A12Q504Y0 691 aa13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 STXBP5Q5T5C0 1151 aa13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 VWA5B1Q5TIE3 1220 aa13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 C4orf50Q6ZRC1 276 aa13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 SPATA2LQ8IUW3 424 aaPredicted RBP13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 SCN4BQ8IWT1 228 aa13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 FCRL2Q96LA5 508 aaPredicted RBP13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 RILPQ96NA2 401 aa13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 NUDCD1Q96RS6 583 aa13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 WWP1Q9H0M0 922 aa13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 OSBPL2Q9H1P3 480 aa13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 ABI2Q9NYB9 513 aaPredicted RBP13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 THSD7BQ9C0I4 1608 aa13.95□□□□□ -0.18
SLC3A2-220ENST00000542922 MTSS1O43312 755 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 TSPY1Q01534 308 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 KDSRQ06136 332 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 MPP3Q13368 585 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 MBTPS1Q14703 1052 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 KHDC1Q4VXA5 237 aaKnown RBP13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 MANEALQ5VSG8 457 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 BTBD8Q5XKL5 378 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 NAPRTQ6XQN6 538 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 KDELC2Q7Z4H8 507 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 ATPAF2Q8N5M1 289 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 TTC9BQ8N6N2 239 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 IPMKQ8NFU5 416 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 WDR60Q8WVS4 1066 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 LINC01599Q8WXQ3 324 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 ZNF570Q96NI8 536 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 CCDC106Q9BWC9 280 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 BRD8Q9H0E9 1235 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 SOX13Q9UN79 622 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 NOD1Q9Y239 953 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 VWA8A3KMH1 1905 aa13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 FNDC1Q4ZHG4 1894 aaPredicted RBP13.94□□□□□ -0.18
SLC3A2-220ENST00000542922 A0A096LPK6 155 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 TMEM88BA6NKF7 163 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 CA12O43570 354 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 MAFKO60675 156 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 HNRNPCL1O60812 293 aaKnown RBP13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 SERPINE1P05121 402 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 TPBGLP0DKB5 382 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 GNAZP19086 355 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 SAT1P21673 171 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 SERPINB8P50452 374 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 YWHAHQ04917 246 aaPredicted RBP13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 GRM3Q14832 879 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 POU6F1Q14863 301 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 KPNB1Q14974 876 aaKnown RBP13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 DDR2Q16832 855 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 CLLU1OSQ5K130 101 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 FAM91A1Q658Y4 838 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 THEM5Q8N1Q8 247 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 TEX9Q8N6V9 391 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 SHKBP1Q8TBC3 707 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 GPR152Q8TDT2 470 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 ISL2Q96A47 359 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 VPS39Q96JC1 886 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 MCMBPQ9BTE3 642 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 ATXN3LQ9H3M9 355 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 SMOC2Q9H3U7 446 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 DSEQ9UL01 958 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 PRG3Q9Y2Y8 225 aaPredicted RBP13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 ERI2A8K979 691 aaKnown RBP13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 MEI4A8MW99 385 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 B2RBV5 119 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 HLA-DQB2P05538 268 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 GRK4P32298 578 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 SPRP35270 261 aaPredicted RBP13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 CHRNA4P43681 627 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 NUMBP49757 651 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 INHBEP58166 350 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 NKX3-2P78367 333 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 ITGA7Q13683 1181 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 NOMO2Q5JPE7 1267 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 SCML4Q8N228 414 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 RBM15BQ8NDT2 890 aaKnown RBP13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 PIWIL2Q8TC59 973 aaKnown RBP13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 VAT1Q99536 393 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 FICDQ9BVA6 458 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 IL22Q9GZX6 179 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 DNAJB4Q9UDY4 337 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 SLC2A6Q9UGQ3 507 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 HS3ST4Q9Y661 456 aa13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.93□□□□□ -0.18
SLC3A2-220ENST00000542922 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.92□□□□□ -0.18
SLC3A2-220ENST00000542922 G3V2L1 256 aa13.92□□□□□ -0.18
SLC3A2-220ENST00000542922 PHGDHO43175 533 aaKnown RBP13.92□□□□□ -0.18
SLC3A2-220ENST00000542922 CACNG3O60359 315 aa13.92□□□□□ -0.18
SLC3A2-220ENST00000542922 C2P06681 752 aa13.92□□□□□ -0.18
SLC3A2-220ENST00000542922 RALBP11234 206 aa13.92□□□□□ -0.18
SLC3A2-220ENST00000542922 CPA3P15088 417 aa13.92□□□□□ -0.18
SLC3A2-220ENST00000542922 GABRB3P28472 473 aa13.92□□□□□ -0.18
SLC3A2-220ENST00000542922 HOXC13P31276 330 aa13.92□□□□□ -0.18
SLC3A2-220ENST00000542922 AVPR1AP37288 418 aa13.92□□□□□ -0.18
SLC3A2-220ENST00000542922 NPY2RP49146 381 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms