RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 CHORDC1Q9UHD1 332 aaPredicted RBP5.59□□□□□ -1.51
CIT-211ENST00000541841 ISY1Q9ULR0 285 aaKnown RBP5.59□□□□□ -1.51
CIT-211ENST00000541841 USP22Q9UPT9 525 aa5.59□□□□□ -1.51
CIT-211ENST00000541841 SH2B3Q9UQQ2 575 aa5.59□□□□□ -1.51
CIT-211ENST00000541841 SNX14Q9Y5W7 946 aa5.59□□□□□ -1.51
CIT-211ENST00000541841 FNDC1Q4ZHG4 1894 aaPredicted RBP5.59□□□□□ -1.51
CIT-211ENST00000541841 WRNQ14191 1432 aaPredicted RBP eCLIP5.58□□□□□ -1.52
CIT-211ENST00000541841 SOS1Q07889 1333 aaPredicted RBP5.58□□□□□ -1.52
CIT-211ENST00000541841 SMIM35A0A1B0GVV1 85 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 SAC3D1A6NKF1 404 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 KCNU1A8MYU2 1149 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 TGFB1I1O43294 461 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 TSPAN9O75954 239 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 ONECUT2O95948 504 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 NNMTP40261 264 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 TNNT3P45378 269 aaPredicted RBP5.58□□□□□ -1.52
CIT-211ENST00000541841 CDK7P50613 346 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 PDE6CP51160 858 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 TPTEP56180 551 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 PTP4A2Q12974 167 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 CAMK1Q14012 370 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 ASIC2Q16515 512 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 TMEM266Q2M3C6 531 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 NAA16Q6N069 864 aaPredicted RBP5.58□□□□□ -1.52
CIT-211ENST00000541841 INO80CQ6PI98 192 aaPredicted RBP5.58□□□□□ -1.52
CIT-211ENST00000541841 KIRREL2Q6UWL6 708 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 TRIM72Q6ZMU5 477 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 MFSD6Q6ZSS7 791 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 CNGA4Q8IV77 575 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 SPARTQ8N0X7 666 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 TAGAPQ8N103 731 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 WDTC1Q8N5D0 677 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 Q8N9P0 234 aaPredicted RBP5.58□□□□□ -1.52
CIT-211ENST00000541841 FSIP1Q8NA03 581 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 MBD3L2Q8NHZ7 208 aaPredicted RBP5.58□□□□□ -1.52
CIT-211ENST00000541841 ETNPPLQ8TBG4 499 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 ZBTB9Q96C00 473 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 ELP4Q96EB1 424 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 FEM1CQ96JP0 617 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 ZNF48Q96MX3 618 aaPredicted RBP5.58□□□□□ -1.52
CIT-211ENST00000541841 JAKMIP1Q96N16 626 aaKnown RBP5.58□□□□□ -1.52
CIT-211ENST00000541841 HIST1H2AAQ96QV6 131 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 WDR24Q96S15 920 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 NUDT22Q9BRQ3 303 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 OR10A4Q9H209 315 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 MUC13Q9H3R2 512 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 MROH8Q9H579 483 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 VEZTQ9HBM0 779 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 SEMA4BQ9NPR2 832 aaPredicted RBP5.58□□□□□ -1.52
CIT-211ENST00000541841 KLHL13Q9P2N7 655 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 CORO1CQ9ULV4 474 aaPredicted RBP5.58□□□□□ -1.52
CIT-211ENST00000541841 GDAQ9Y2T3 454 aa5.58□□□□□ -1.52
CIT-211ENST00000541841 EEA1Q15075 1411 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 ZNF521Q96K83 1311 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 PASKQ96RG2 1323 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 KDM3AQ9Y4C1 1321 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 AGAP5A6NIR3 686 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 AP4M1O00189 453 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 TSPAN4O14817 238 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 CBFA2T3O75081 653 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 MTA2O94776 668 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 LARGE1O95461 756 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 NR2F1P10589 423 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 NFKBIAP25963 317 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 CERS1P27544 350 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 ICAM3P32942 547 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 HTR7P34969 479 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 PGDP52209 483 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 SCARB2Q14108 478 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 DCTN1Q14203 1278 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 CYP1B1Q16678 543 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 CBWD5Q5RIA9 395 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 UBAP2Q5T6F2 1119 aaKnown RBP5.57□□□□□ -1.52
CIT-211ENST00000541841 MORN5Q5VZ52 161 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 CLEC9AQ6UXN8 241 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 PIK3AP1Q6ZUJ8 805 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 RP9Q8TA86 221 aaKnown RBP5.57□□□□□ -1.52
CIT-211ENST00000541841 OSCP1Q8WVF1 389 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 RUFY2Q8WXA3 655 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 SOCS4Q8WXH5 440 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 NCSTNQ92542 709 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 KIF1BPQ96EK5 621 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 LBHD1Q9BQE6 289 aaPredicted RBP5.57□□□□□ -1.52
CIT-211ENST00000541841 TRIM5Q9C035 493 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 INTS2Q9H0H0 1204 aaKnown RBP5.57□□□□□ -1.52
CIT-211ENST00000541841 TAOK3Q9H2K8 898 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 RANBP17Q9H2T7 1088 aaKnown RBP5.57□□□□□ -1.52
CIT-211ENST00000541841 WDR26Q9H7D7 661 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 GRPEL1Q9HAV7 217 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 ERVK-5Q9HDB9 667 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.57□□□□□ -1.52
CIT-211ENST00000541841 BAG5Q9UL15 447 aa5.57□□□□□ -1.52
CIT-211ENST00000541841 BAZ1AQ9NRL2 1556 aaPredicted RBP5.57□□□□□ -1.52
CIT-211ENST00000541841 PEG3Q9GZU2 1588 aa5.56□□□□□ -1.52
CIT-211ENST00000541841 UBE2CO00762 179 aa5.56□□□□□ -1.52
CIT-211ENST00000541841 TNFSF14O43557 240 aa5.56□□□□□ -1.52
CIT-211ENST00000541841 DHX16O60231 1041 aaKnown RBP5.56□□□□□ -1.52
CIT-211ENST00000541841 SPARCP09486 303 aa5.56□□□□□ -1.52
CIT-211ENST00000541841 WEE2P0C1S8 567 aa5.56□□□□□ -1.52
CIT-211ENST00000541841 ACP5P13686 325 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms