RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 PCDHGA12O60330 932 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 TSPAN3O60637 253 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 RFPL3O75679 317 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 LDOC1O95751 146 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 IGLV3-19P01714 112 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 IGLV3-25P01717 112 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 FTLP02792 175 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 KLKB1P03952 638 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 DNTTP04053 509 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 ITGAVP06756 1048 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 FAM228BP0C875 321 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 MYBL1P10243 752 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 ABCB4P21439 1286 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 NOS2P35228 1153 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 EIF4A3P38919 411 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 CFHR1Q03591 330 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 CCDC173Q0VFZ6 552 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 EIF4EBP2Q13542 120 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 ENPP2Q13822 863 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 TAF5Q15542 800 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 TRIP4Q15650 581 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 SLC18A3Q16572 532 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 TAF1BQ53T94 588 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 C2CD6Q53TS8 623 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 FAM102AQ5T9C2 384 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 HES3Q5TGS1 186 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 SYPL2Q5VXT5 272 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 ALKBH5Q6P6C2 394 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 GPR155Q7Z3F1 870 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 DEFB106AQ8N104 65 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 EID2Q8N6I1 236 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 C3orf20Q8ND61 904 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 DQX1Q8TE96 717 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 NT5C3BQ969T7 300 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 PLD4Q96BZ4 506 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 TRIM11Q96F44 468 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 SERPINB11Q96P15 392 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 CHP1Q99653 195 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 ACE2Q9BYF1 805 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 PCED1AQ9H1Q7 454 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 DEF6Q9H4E7 631 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 NHEJ1Q9H9Q4 299 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 NAALADL1Q9UQQ1 740 aa8.98□□□□□ -0.97
CLSTN3-212ENST00000541770 CELSR3Q9NYQ7 3312 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 APC2O95996 2303 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 SLC12A8A0AV02 714 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 SIGLEC16A6NMB1 481 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 TMCO5BA8MYB1 307 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 GOLGA6L6A8MZA4 724 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 J3QKU1 62 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 IRAK2O43187 625 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 GRAP2O75791 330 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 PENKP01210 267 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 IGLV3-27P01718 113 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 KRT3P12035 628 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 CD27P26842 260 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 CTSKP43235 329 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 EIF4HQ15056 248 aaKnown RBP8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 SLC25A52Q3SY17 297 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 TTC31Q49AM3 519 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 DCAF6Q58WW2 860 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 PPP1R15BQ5SWA1 713 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 TMEM215Q68D42 235 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 PLEKHA7Q6IQ23 1121 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 CHST9Q7L1S5 443 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 TAC4Q86UU9 113 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 UNC45BQ8IWX7 931 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 CCDC170Q8IYT3 715 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 PGAP3Q96FM1 320 aaPredicted RBP8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 NAF1Q96HR8 494 aaKnown RBP8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 CCDC42Q96M95 316 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 SLC6A18Q96N87 628 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 NPY6RQ99463 290 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 SELENOOQ9BVL4 669 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 DCLK3Q9C098 648 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 AASDHPPTQ9NRN7 309 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 METTL5Q9NRN9 209 aaKnown RBP8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 PARVAQ9NVD7 372 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 SFMBT1Q9UHJ3 866 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 AGO1Q9UL18 857 aaKnown RBP8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 STAP1Q9ULZ2 295 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 PLA2G4CQ9UP65 541 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 NCKAP1Q9Y2A7 1128 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 TLR6Q9Y2C9 796 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 BPTFQ12830 3046 aa8.97□□□□□ -0.97
CLSTN3-212ENST00000541770 A0A1B0GTQ1 180 aa8.96□□□□□ -0.98
CLSTN3-212ENST00000541770 TEX51A0A1B0GUA7 166 aa8.96□□□□□ -0.98
CLSTN3-212ENST00000541770 ANKRD62A6NC57 917 aa8.96□□□□□ -0.98
CLSTN3-212ENST00000541770 C2CD4BA6NLJ0 364 aa8.96□□□□□ -0.98
CLSTN3-212ENST00000541770 GOLGA8SH3BPF8 625 aa8.96□□□□□ -0.98
CLSTN3-212ENST00000541770 PYCARD-AS1I3L0S3 204 aa8.96□□□□□ -0.98
CLSTN3-212ENST00000541770 TIMM44O43615 452 aa8.96□□□□□ -0.98
CLSTN3-212ENST00000541770 AKR1B10O60218 316 aa8.96□□□□□ -0.98
CLSTN3-212ENST00000541770 DFNA5O60443 496 aa8.96□□□□□ -0.98
CLSTN3-212ENST00000541770 LATS1O95835 1130 aa8.96□□□□□ -0.98
CLSTN3-212ENST00000541770 TRUB2O95900 331 aaKnown RBP8.96□□□□□ -0.98
CLSTN3-212ENST00000541770 F9P00740 461 aa8.96□□□□□ -0.98
CLSTN3-212ENST00000541770 RRM1P23921 792 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms