RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 HPS6Q86YV9 775 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 DEFB107AQ8IZN7 70 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 PHTF2Q8N3S3 785 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 ATXN7L3BQ96GX2 97 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 SPATA13Q96N96 652 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 OXCT2Q9BYC2 517 aaPredicted RBP12.78□□□□□ -0.36
RNF4-222ENST00000541204 MAN1C1Q9NR34 630 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 SYBUQ9NX95 663 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 PADI3Q9ULW8 664 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 STAP1Q9ULZ2 295 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 RALGAPA2Q2PPJ7 1873 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 I6L893 689 aaPredicted RBP12.78□□□□□ -0.36
RNF4-222ENST00000541204 EEF2KO00418 725 aaKnown RBP12.78□□□□□ -0.36
RNF4-222ENST00000541204 ZNF195O14628 629 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 DGKIO75912 1065 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 ASGR1P07306 291 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 RALBP11234 206 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 PGAM1P18669 254 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 RAB27AP51159 221 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 ABCE1P61221 599 aaKnown RBP12.78□□□□□ -0.36
RNF4-222ENST00000541204 USP4Q13107 963 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 LRRC8BQ6P9F7 803 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 FRMD7Q6ZUT3 714 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 CMC1Q7Z7K0 106 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 TNS4Q8IZW8 715 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 ZMIZ2Q8NF64 920 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 ZFAND2BQ8WV99 257 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 P2RY11Q96G91 374 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 AGAP3Q96P47 875 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 NPY6RQ99463 290 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 SENP6Q9GZR1 1112 aaPredicted RBP12.78□□□□□ -0.36
RNF4-222ENST00000541204 FAM192AQ9GZU8 254 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 SLC38A7Q9NVC3 462 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 DDIT4Q9NX09 232 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 DNAJC28Q9NX36 388 aa12.78□□□□□ -0.36
RNF4-222ENST00000541204 DCXO43602 365 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 MLNP12872 115 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 ELNP15502 786 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 PEX2P28328 305 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 FDFT1P37268 417 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 AQP4P55087 323 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 CUL3Q13618 768 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 RASIP1Q5U651 963 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 PGM2L1Q6PCE3 622 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 ADGRG6Q86SQ4 1221 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 ACTRT2Q8TDY3 377 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 OLFM3Q96PB7 478 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 TMEM209Q96SK2 561 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 PRDM12Q9H4Q4 367 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 SPC25Q9HBM1 224 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 TXNDC16Q9P2K2 825 aa12.77□□□□□ -0.36
RNF4-222ENST00000541204 ABT1Q9ULW3 272 aaKnown RBP12.77□□□□□ -0.36
RNF4-222ENST00000541204 USP12O75317 370 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 TOMM70O94826 608 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 CYBAP13498 195 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 ITGAXP20702 1163 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 BDNFP23560 247 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 GRK2P25098 689 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 PSMB4P28070 264 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 GSTT1P30711 240 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 SERPINB6P35237 376 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 PRKCZQ05513 592 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 MSLNQ13421 630 aaPredicted RBP12.77□□□□□ -0.37
RNF4-222ENST00000541204 HNRNPDQ14103 355 aaKnown RBP12.77□□□□□ -0.37
RNF4-222ENST00000541204 GDPD5Q8WTR4 605 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 PGBD4Q96DM1 585 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 CMTM5Q96DZ9 223 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 TRMT13Q9NUP7 481 aaKnown RBP12.77□□□□□ -0.37
RNF4-222ENST00000541204 POMPQ9Y244 141 aa12.77□□□□□ -0.37
RNF4-222ENST00000541204 ITGB1P05556 798 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 CCND3P30281 292 aaPredicted RBP12.76□□□□□ -0.37
RNF4-222ENST00000541204 SCNN1AP37088 669 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 GJA9P57773 515 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 DAOAP59103 153 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 KCNA10Q16322 511 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 MFSD14CQ5VZR4 134 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 SERINC5Q86VE9 423 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 HACE1Q8IYU2 909 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 AGR3Q8TD06 166 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 MYLPFQ96A32 169 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 KLHL4Q9C0H6 718 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 SNX15Q9NRS6 342 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 NOD1Q9Y239 953 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 E9PBE3 544 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 KLHL41O60662 606 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 CPA3P15088 417 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 ALOX15P16050 662 aaPredicted RBP12.76□□□□□ -0.37
RNF4-222ENST00000541204 LHX1P48742 406 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 CDK7P50613 346 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 CAP1Q01518 475 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 BTKQ06187 659 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 TBL3Q12788 808 aaKnown RBP12.76□□□□□ -0.37
RNF4-222ENST00000541204 MED21Q13503 144 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 CNPY1Q3B7I2 92 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 ACAD11Q709F0 780 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 PLD6Q8N2A8 252 aaKnown RBP12.76□□□□□ -0.37
RNF4-222ENST00000541204 ZNF781Q8N8C0 355 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 RNF34Q969K3 372 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 ADAM2Q99965 735 aa12.76□□□□□ -0.37
RNF4-222ENST00000541204 COG4Q9H9E3 785 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms