RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 SMTNL2Q2TAL5 461 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 PPP6R3Q5H9R7 873 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-215ENST00000540904 IL31Q6EBC2 164 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 SLC36A4Q6YBV0 504 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 METTL3Q86U44 580 aaKnown RBP9.45□□□□□ -0.9
SNHG1-215ENST00000540904 FAM124AQ86V42 546 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 MMAAQ8IVH4 418 aaKnown RBP9.45□□□□□ -0.9
SNHG1-215ENST00000540904 KIAA2013Q8IYS2 634 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 STK40Q8N2I9 435 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 SH2D3CQ8N5H7 860 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 RTL3Q8N8U3 475 aaKnown RBP9.45□□□□□ -0.9
SNHG1-215ENST00000540904 TC2NQ8N9U0 490 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 ZNF564Q8TBZ8 553 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-215ENST00000540904 GANCQ8TET4 914 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 FRS2Q8WU20 508 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 PTPRN2Q92932 1015 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 TOE1Q96GM8 510 aaKnown RBP9.45□□□□□ -0.9
SNHG1-215ENST00000540904 NCAPGQ9BPX3 1015 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 RSPH9Q9H1X1 276 aaPredicted RBP9.45□□□□□ -0.9
SNHG1-215ENST00000540904 RETREG1Q9H6L5 497 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 CATSPERBQ9H7T0 1116 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 ZWILCHQ9H900 591 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 USP36Q9P275 1121 aaKnown RBP9.45□□□□□ -0.9
SNHG1-215ENST00000540904 HS3ST2Q9Y278 367 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 MYO15AQ9UKN7 3530 aa9.45□□□□□ -0.9
SNHG1-215ENST00000540904 FANCMQ8IYD8 2048 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 GPR179Q6PRD1 2367 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 EEF2KO00418 725 aaKnown RBP9.44□□□□□ -0.9
SNHG1-215ENST00000540904 MID1O15344 667 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 DAPK3O43293 454 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 SMAD6O43541 496 aaKnown RBP9.44□□□□□ -0.9
SNHG1-215ENST00000540904 EPN2O95208 641 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 IL1BP01584 269 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 DNTTP04053 509 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 TMEM253P0C7T8 217 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 SRCP12931 536 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 TCF4P15884 667 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 OXTRP30559 389 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 MPLP40238 635 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 PTGER3P43115 390 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 PSMD8P48556 350 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 VASPP50552 380 aaPredicted RBP9.44□□□□□ -0.9
SNHG1-215ENST00000540904 ZBTB16Q05516 673 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 ELAVL3Q14576 367 aaKnown RBP9.44□□□□□ -0.9
SNHG1-215ENST00000540904 POLD3Q15054 466 aaPredicted RBP9.44□□□□□ -0.9
SNHG1-215ENST00000540904 CST6Q15828 149 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 KCNT1Q5JUK3 1230 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 RETSATQ6NUM9 610 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 Q6ZVU0 165 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 CYP4V2Q6ZWL3 525 aaPredicted RBP9.44□□□□□ -0.9
SNHG1-215ENST00000540904 CYP2U1Q7Z449 544 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 ZNF354CQ86Y25 554 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 PSTKQ8IV42 348 aaKnown RBP9.44□□□□□ -0.9
SNHG1-215ENST00000540904 NIPA2Q8N8Q9 360 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 HSPH1Q92598 858 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 ARHGEF2Q92974 986 aaKnown RBP9.44□□□□□ -0.9
SNHG1-215ENST00000540904 KCTD15Q96SI1 283 aaPredicted RBP9.44□□□□□ -0.9
SNHG1-215ENST00000540904 FAM129BQ96TA1 746 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 MAGEH1Q9H213 219 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 SMOC1Q9H4F8 434 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 PARD6AQ9NPB6 346 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 OSGEPQ9NPF4 335 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 SEMA4GQ9NTN9 838 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.44□□□□□ -0.9
SNHG1-215ENST00000540904 UVRAGQ9P2Y5 699 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 HPCAL4Q9UM19 191 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 PCDHGA5Q9Y5G8 931 aa9.44□□□□□ -0.9
SNHG1-215ENST00000540904 MYO18AQ92614 2054 aaKnown RBP9.44□□□□□ -0.9
SNHG1-215ENST00000540904 MUC22E2RYF6 1773 aaPredicted RBP9.43□□□□□ -0.9
SNHG1-215ENST00000540904 BCLAF3A2AJT9 711 aaKnown RBP9.43□□□□□ -0.9
SNHG1-215ENST00000540904 TMEM110-MUSTN1A8MSY1 372 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 WASH4PA8MWX3 477 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 EIF3CLB5ME19 914 aaKnown RBP9.43□□□□□ -0.9
SNHG1-215ENST00000540904 FGF10O15520 208 aaPredicted RBP9.43□□□□□ -0.9
SNHG1-215ENST00000540904 LRP3O75074 770 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 ZMPSTE24O75844 475 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 IGLV3-19P01714 112 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 GOT1P17174 413 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 TGM1P22735 817 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 SLC8A1P32418 973 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 HTR7P34969 479 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 SERPINH1P50454 418 aaKnown RBP9.43□□□□□ -0.9
SNHG1-215ENST00000540904 ARF5P84085 180 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 ZNF33AQ06730 810 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 CSRP2Q16527 193 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 POM121L1PQ3SYA9 428 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 TTC31Q49AM3 519 aaPredicted RBP9.43□□□□□ -0.9
SNHG1-215ENST00000540904 BOLA3Q53S33 107 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 SPDYCQ5MJ68 293 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 LYSMD4Q5XG99 296 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 TXNRD3NBQ6F5E7 133 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 LEKR1Q6ZMV7 388 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 RFX8Q6ZV50 586 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 DSG4Q86SJ6 1040 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 GPR161Q8N6U8 529 aaKnown RBP9.43□□□□□ -0.9
SNHG1-215ENST00000540904 SLC35G2Q8TBE7 412 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 OR8D1Q8WZ84 308 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 PIGKQ92643 395 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 HMCESQ96FZ2 354 aa9.43□□□□□ -0.9
SNHG1-215ENST00000540904 HSPA12BQ96MM6 686 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms