RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 NSUN7Q8NE18 718 aaKnown RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 OR2T3Q8NH03 318 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 UCMAQ8WVF2 138 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 KBTBD7Q8WVZ9 684 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 FBXO32Q969P5 355 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 WBP2Q969T9 261 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 BIRC7Q96CA5 298 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 PCED1BQ96HM7 432 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 HEXIM2Q96MH2 286 aaKnown RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 FERD3LQ96RJ6 166 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 ORAI3Q9BRQ5 295 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 MMTAG2Q9BU76 263 aaKnown RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 ELOVL4Q9GZR5 314 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 BTBD1Q9H0C5 482 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 LHX5Q9H2C1 402 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 PARVGQ9HBI0 331 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 SGK2Q9HBY8 427 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 THSD1Q9NS62 852 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 COMMD8Q9NX08 183 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 SIX4Q9UIU6 781 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 LSM7Q9UK45 103 aaKnown RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 NOL7Q9UMY1 257 aaKnown RBP4.84□□□□□ -1.63
SNHG1-214ENST00000540865 DNHD1Q96M86 4753 aa4.84□□□□□ -1.63
SNHG1-214ENST00000540865 MYO18AQ92614 2054 aaKnown RBP4.84□□□□□ -1.64
SNHG1-214ENST00000540865 COL5A1P20908 1838 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-214ENST00000540865 MUC22E2RYF6 1773 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-214ENST00000540865 PTPRJQ12913 1337 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 A0A1W2PPC4 97 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 FAM92AA1XBS5 289 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 ENO4A6NNW6 628 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 TISP43B9A030 160 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 SUV39H1O43463 412 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 TIMM44O43615 452 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 TLR5O60602 858 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 FSBPO95073 299 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 MED26O95402 600 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 PENKP01210 267 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-214ENST00000540865 IGHV4-34P06331 123 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 EPHX1P07099 455 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 KRT19P08727 400 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 PDGFRBP09619 1106 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 IRF1P10914 325 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 PTPN1P18031 435 aaKnown RBP4.83□□□□□ -1.64
SNHG1-214ENST00000540865 ACP1P24666 158 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 EPHA8P29322 1005 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-214ENST00000540865 GNL1P36915 607 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-214ENST00000540865 RXRGP48443 463 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 CACNA2D1P54289 1103 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 MFAP3P55082 362 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 GABREP78334 506 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 GOLGA8FQ08AF8 430 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 GOLGA8DPQ0D2H9 430 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 ZNF234Q14588 700 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 ZRSR1Q15695 479 aaKnown RBP4.83□□□□□ -1.64
SNHG1-214ENST00000540865 GEN1Q17RS7 908 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 TMEM119Q4V9L6 283 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 PRAMEF14Q5SWL7 426 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 SFMBT2Q5VUG0 894 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 KIAA0895LQ68EN5 471 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 LAYNQ6UX15 382 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 KDM7AQ6ZMT4 941 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 TPGS1Q6ZTW0 290 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 FAM214BQ7L5A3 538 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 CCDC83Q8IWF9 413 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 PHACTR4Q8IZ21 702 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 OXR1Q8N573 874 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 NECAB1Q8N987 351 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 EXD3Q8N9H8 876 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 MFSD2AQ8NA29 543 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 GIMAP7Q8NHV1 300 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 POMGNT1Q8WZA1 660 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 GTF3C6Q969F1 213 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 FIZ1Q96SL8 496 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 MMS19Q96T76 1030 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 REEP2Q9BRK0 252 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 FAM213AQ9BRX8 229 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 TRIM9Q9C026 710 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 NACA2Q9H009 215 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 ST6GALNAC4Q9H4F1 302 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 ERVMER34-1Q9H9K5 563 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 POLR1BQ9H9Y6 1135 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 GDF3Q9NR23 364 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 STARD5Q9NSY2 213 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 TMEM30AQ9NV96 361 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 ELOVL2Q9NXB9 296 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 IL37Q9NZH6 218 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 CHORDC1Q9UHD1 332 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-214ENST00000540865 R3HCC1Q9Y3T6 440 aaKnown RBP4.83□□□□□ -1.64
SNHG1-214ENST00000540865 PCDHB1Q9Y5F3 818 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 ZFHX3Q15911 3703 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 SPENQ96T58 3664 aaKnown RBP4.83□□□□□ -1.64
SNHG1-214ENST00000540865 DOPEY1Q5JWR5 2465 aa4.83□□□□□ -1.64
SNHG1-214ENST00000540865 CSMD1Q96PZ7 3565 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 ATP8B3O60423 1300 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 TSC2P49815 1807 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 A0A1W2PR77 199 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 KIAA1324LA8MWY0 1029 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-214ENST00000540865 CYP26A1O43174 497 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 SLC26A4O43511 780 aa4.82□□□□□ -1.64
SNHG1-214ENST00000540865 JAK2O60674 1132 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms