RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 RFX6Q8HWS3 928 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 PYROXD2Q8N2H3 581 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 SYNPOQ8N3V7 929 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 PLD5Q8N7P1 536 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.88□□□□□ -0.67
ATL3-204ENST00000540699 HJURPQ8NCD3 748 aaPredicted RBP10.88□□□□□ -0.67
ATL3-204ENST00000540699 PCDH19Q8TAB3 1148 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 SLC35B2Q8TB61 432 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 TMA16Q96EY4 203 aaKnown RBP10.88□□□□□ -0.67
ATL3-204ENST00000540699 CSPG4P5Q96PW8 444 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 XPO6Q96QU8 1125 aaKnown RBP10.88□□□□□ -0.67
ATL3-204ENST00000540699 CALN1Q9BXU9 219 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 FRMD8P1Q9BZ68 369 aaPredicted RBP10.88□□□□□ -0.67
ATL3-204ENST00000540699 OSBPL2Q9H1P3 480 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 DHX35Q9H5Z1 703 aaKnown RBP10.88□□□□□ -0.67
ATL3-204ENST00000540699 TMPRSS4Q9NRS4 437 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 DEC1Q9P2X7 70 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 SIT1Q9Y3P8 196 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 NEU2Q9Y3R4 380 aa10.88□□□□□ -0.67
ATL3-204ENST00000540699 CKAP5Q14008 2032 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 DRGXA6NNA5 263 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 F5H5T6 163 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 TSPAN3O60637 253 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 MYBL2P10244 700 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 PECAM1P16284 738 aaPredicted RBP10.87□□□□□ -0.67
ATL3-204ENST00000540699 TGM2P21980 687 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 GRIA2P42262 883 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 RPS24P62847 133 aaKnown RBP10.87□□□□□ -0.67
ATL3-204ENST00000540699 OTUD4Q01804 1114 aaKnown RBP10.87□□□□□ -0.67
ATL3-204ENST00000540699 GUCY2DQ02846 1103 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 GRSF1Q12849 480 aaKnown RBP eCLIP10.87□□□□□ -0.67
ATL3-204ENST00000540699 TFDP2Q14188 446 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 UBXN2BQ14CS0 331 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 NOMO1Q15155 1222 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 ARL13BQ3SXY8 428 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 FBXO43Q4G163 708 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 PREPLQ4J6C6 727 aaPredicted RBP10.87□□□□□ -0.67
ATL3-204ENST00000540699 EFHC2Q5JST6 749 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 MANEALQ5VSG8 457 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 DUPD1Q68J44 220 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 FBXL22Q6P050 247 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 CCNI2Q6ZMN8 369 aaPredicted RBP10.87□□□□□ -0.67
ATL3-204ENST00000540699 MAMSTRQ6ZN01 415 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 C14orf80Q86SX3 495 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 LGI2Q8N0V4 545 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 ZNF557Q8N988 423 aaPredicted RBP10.87□□□□□ -0.67
ATL3-204ENST00000540699 EIF1ADQ8N9N8 165 aaKnown RBP10.87□□□□□ -0.67
ATL3-204ENST00000540699 TERB1Q8NA31 727 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 TTC13Q8NBP0 860 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 ATL2Q8NHH9 583 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 ACTL9Q8TC94 416 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 DDI1Q8WTU0 396 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 HNRNPLLQ8WVV9 542 aaKnown RBP10.87□□□□□ -0.67
ATL3-204ENST00000540699 CASKIN2Q8WXE0 1202 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 IGSF8Q969P0 613 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 LMLNQ96KR4 655 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 TRIM51Q9BSJ1 452 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 IER2Q9BTL4 223 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 CHRDQ9H2X0 955 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 PRDM16Q9HAZ2 1276 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 ARHGEF4Q9NR80 690 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 DNAJC17Q9NVM6 304 aaKnown RBP10.87□□□□□ -0.67
ATL3-204ENST00000540699 PLK2Q9NYY3 685 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 CWC15Q9P013 229 aaKnown RBP10.87□□□□□ -0.67
ATL3-204ENST00000540699 DNPEPQ9ULA0 475 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 CLEC4EQ9ULY5 219 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 NDRG2Q9UN36 371 aaKnown RBP10.87□□□□□ -0.67
ATL3-204ENST00000540699 DRG1Q9Y295 367 aaKnown RBP10.87□□□□□ -0.67
ATL3-204ENST00000540699 CEP250Q9BV73 2442 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 NUP205Q92621 2012 aa10.87□□□□□ -0.67
ATL3-204ENST00000540699 A0A1B0GVM2 712 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 ESYT3A0FGR9 886 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 TCAF2A6NFQ2 919 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 K7EQS6 105 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 APOL1O14791 398 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 TRIM24O15164 1050 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 NCAM2O15394 837 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 TBL1XO60907 577 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 KAT7O95251 611 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 ECEL1O95672 775 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 EGFP01133 1207 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 APODP05090 189 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 DCNP07585 359 aaKnown RBP10.86□□□□□ -0.67
ATL3-204ENST00000540699 GOT1P17174 413 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 ECHS1P30084 290 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 TNFRSF4P43489 277 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 DGKGP49619 791 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 ZNF135P52742 658 aaPredicted RBP10.86□□□□□ -0.67
ATL3-204ENST00000540699 DRG2P55039 364 aaKnown RBP10.86□□□□□ -0.67
ATL3-204ENST00000540699 DYNLT1P63172 113 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 SNX1Q13596 522 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 PTK6Q13882 451 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 DPYSQ14117 519 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 LRRC32Q14392 662 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 TRADDQ15628 312 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 PPP6R3Q5H9R7 873 aaPredicted RBP10.86□□□□□ -0.67
ATL3-204ENST00000540699 RABGAP1LQ5R372 815 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 GRAMD4Q6IC98 578 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 NPNTQ6UXI9 565 aa10.86□□□□□ -0.67
ATL3-204ENST00000540699 SYDE1Q6ZW31 735 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms