RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 A0A1W2PP55 124 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 TBC1D3FA6NER0 549 aaPredicted RBP10.65□□□□□ -0.7
CDCA3-208ENST00000540683 FAM47DPA6NHR8 397 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 EIF3CLB5ME19 914 aaKnown RBP10.65□□□□□ -0.7
CDCA3-208ENST00000540683 TBC1D3LB9A6J9 549 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 MID1O15344 667 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 PCDHGA12O60330 932 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 ENDOD1O94919 500 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 CYP1A1P04798 512 aaPredicted RBP10.65□□□□□ -0.7
CDCA3-208ENST00000540683 TBC1D3HP0C7X1 549 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 MAOBP27338 520 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 CD38P28907 300 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 GRK6P43250 576 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 GALCP54803 685 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 CENPCQ03188 943 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 DLG2Q15700 870 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 HLA-BQ31612 363 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 SETMARQ53H47 684 aaPredicted RBP10.65□□□□□ -0.7
CDCA3-208ENST00000540683 PPP1R15BQ5SWA1 713 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 TBC1D3GQ6DHY5 549 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 TBC1D3CQ6IPX1 549 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 NCEH1Q6PIU2 408 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 IQCHQ86VS3 1027 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 PHF13Q86YI8 300 aaPredicted RBP10.65□□□□□ -0.7
CDCA3-208ENST00000540683 TBC1D3Q8IZP1 549 aaPredicted RBP10.65□□□□□ -0.7
CDCA3-208ENST00000540683 APCDD1Q8J025 514 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 STK40Q8N2I9 435 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 SH2D3CQ8N5H7 860 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 PCDH20Q8N6Y1 951 aaKnown RBP10.65□□□□□ -0.7
CDCA3-208ENST00000540683 C3orf20Q8ND61 904 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 GPT2Q8TD30 523 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 SETD7Q8WTS6 366 aaKnown RBP10.65□□□□□ -0.7
CDCA3-208ENST00000540683 CASKIN2Q8WXE0 1202 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 PTPRN2Q92932 1015 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 ARHGEF26Q96DR7 871 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 LRIG1Q96JA1 1093 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 TBCBQ99426 244 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 EIF3CQ99613 913 aaKnown RBP10.65□□□□□ -0.7
CDCA3-208ENST00000540683 ZMYND15Q9H091 742 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 TM9SF3Q9HD45 589 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 GDF3Q9NR23 364 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 AASDHPPTQ9NRN7 309 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 SEPT11Q9NVA2 429 aaKnown RBP10.65□□□□□ -0.7
CDCA3-208ENST00000540683 OR12D3Q9UGF7 316 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 SLCO3A1Q9UIG8 710 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 NEUROG3Q9Y4Z2 214 aa10.65□□□□□ -0.7
CDCA3-208ENST00000540683 PCDH15Q96QU1 1955 aa10.65□□□□□ -0.71
CDCA3-208ENST00000540683 SRGAP2O75044 1071 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 GJB3O75712 270 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 ADCY5O95622 1261 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 PNMA6AP0CW24 399 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-208ENST00000540683 CD59P13987 128 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 ADRA1BP35368 520 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 CSNK1EP49674 416 aaKnown RBP10.64□□□□□ -0.71
CDCA3-208ENST00000540683 ZNF135P52742 658 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-208ENST00000540683 ADPRHP54922 357 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 PITX1P78337 314 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-208ENST00000540683 TYRO3Q06418 890 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 RAD51Q06609 339 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 FOXC1Q12948 553 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 POLD3Q15054 466 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-208ENST00000540683 ST3GAL2Q16842 350 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 CLEC16AQ2KHT3 1053 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 HS1BP3Q53T59 392 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 EFHC2Q5JST6 749 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 NAPEPLDQ6IQ20 393 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 DPY19L2P1Q6NXN4 242 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 DNAJC24Q6P3W2 148 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 DCUN1D2Q6PH85 259 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 MMS22LQ6ZRQ5 1243 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 VPS36Q86VN1 386 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 TRIM69Q86WT6 500 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 PLPP6Q8IY26 295 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 C1orf216Q8TAB5 229 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 RHBDD1Q8TEB9 315 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 FRS2Q8WU20 508 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 NTAN1Q96AB6 310 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 ISG20Q96AZ6 181 aaKnown RBP10.64□□□□□ -0.71
CDCA3-208ENST00000540683 TRIM11Q96F44 468 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 CFAP57Q96MR6 1250 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 CNTNAP3BQ96NU0 1288 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 FAM129BQ96TA1 746 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 ADAM33Q9BZ11 813 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 CNTNAP3Q9BZ76 1288 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 EDEM3Q9BZQ6 932 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 MAGEH1Q9H213 219 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 NEUROG2Q9H2A3 272 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 CATSPERBQ9H7T0 1116 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 ERVMER34-1Q9H9K5 563 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 ATP13A1Q9HD20 1204 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 METTL5Q9NRN9 209 aaKnown RBP10.64□□□□□ -0.71
CDCA3-208ENST00000540683 EVA1BQ9NVM1 165 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 AJAP1Q9UKB5 411 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-208ENST00000540683 SIK3Q9Y2K2 1263 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 PCNX2A6NKB5 2137 aa10.64□□□□□ -0.71
CDCA3-208ENST00000540683 A0A1B0GVT2 93 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 SIGLEC16A6NMB1 481 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 PRAMEF26H0Y7S4 382 aa10.63□□□□□ -0.71
CDCA3-208ENST00000540683 PLRG1O43660 514 aaKnown RBP10.63□□□□□ -0.71
CDCA3-208ENST00000540683 TPM3P06753 285 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms