RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 PPIDQ08752 370 aaKnown RBP11.75□□□□□ -0.53
C11orf54-214ENST00000540113 SCAPQ12770 1279 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 ANO7Q6IWH7 933 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 RIPOR1Q6ZS17 1223 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 ULK2Q8IYT8 1036 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 ZNF781Q8N8C0 355 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 RAB3IL1Q8TBN0 382 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 ACMSDQ8TDX5 336 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 SCG3Q8WXD2 468 aaKnown RBP11.75□□□□□ -0.53
C11orf54-214ENST00000540113 ZIC5Q96T25 663 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 CPNE1Q99829 537 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 PRDM16Q9HAZ2 1276 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 CNGB3Q9NQW8 809 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 SLC7A8Q9UHI5 535 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 CDH9Q9ULB4 789 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 ABT1Q9ULW3 272 aaKnown RBP11.75□□□□□ -0.53
C11orf54-214ENST00000540113 G3BP2Q9UN86 482 aaKnown RBP11.75□□□□□ -0.53
C11orf54-214ENST00000540113 PTCH2Q9Y6C5 1203 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 NLRC5Q86WI3 1866 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 PTPRDP23468 1912 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 TMEM88BA6NKF7 163 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.75□□□□□ -0.53
C11orf54-214ENST00000540113 NVLO15381 856 aaKnown RBP11.75□□□□□ -0.53
C11orf54-214ENST00000540113 SIN3BO75182 1162 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 GLRBP48167 497 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 ABCE1P61221 599 aaKnown RBP11.75□□□□□ -0.53
C11orf54-214ENST00000540113 ITGA7Q13683 1181 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 RABGAP1LQ5R372 815 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 GRTP1Q5TC63 336 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 FAM91A1Q658Y4 838 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 KCTD11Q693B1 232 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 KCNMB4Q86W47 210 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 SPATA6LQ8N4H0 392 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 CNTD1Q8N815 330 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 PNPLA1Q8N8W4 532 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 CFAP61Q8NHU2 1237 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 ZNF419Q96HQ0 510 aaPredicted RBP11.75□□□□□ -0.53
C11orf54-214ENST00000540113 SLC9A7Q96T83 725 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 GBA3Q9H227 469 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 CYP4F11Q9HBI6 524 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 CASS4Q9NQ75 786 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 SLC39A10Q9ULF5 831 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 PADI3Q9ULW8 664 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 APOBEC2Q9Y235 224 aaKnown RBP11.75□□□□□ -0.53
C11orf54-214ENST00000540113 INPP5FQ9Y2H2 1132 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 TTC3P53804 2025 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 PATJQ8NI35 1801 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 GOLGA8QA0A0J9YX86 632 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 GOLGA8OA6NCC3 632 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 GOLGA8NF8WBI6 632 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 PHGDHO43175 533 aaKnown RBP11.74□□□□□ -0.53
C11orf54-214ENST00000540113 MSI1O43347 362 aaKnown RBP11.74□□□□□ -0.53
C11orf54-214ENST00000540113 ADAMTS4O75173 837 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 PDE5AO76074 875 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 LMNAP02545 664 aaKnown RBP11.74□□□□□ -0.53
C11orf54-214ENST00000540113 TUBP50607 506 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 SLC34A1Q06495 639 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 DSC3Q14574 896 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 ZNF460Q14592 562 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 EML3Q32P44 896 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 LRRC74BQ6ZQY2 392 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 TMEM135Q86UB9 458 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 LRRTM3Q86VH5 581 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 CCNJLQ8IV13 435 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 KBTBD2Q8IY47 623 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 PHTF2Q8N3S3 785 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 MAPK15Q8TD08 544 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 PPP4R1Q8TF05 950 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 UCMAQ8WVF2 138 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 SMARCD1Q96GM5 515 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 ZNF333Q96JL9 665 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 PKMYT1Q99640 499 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 OSBPL1AQ9BXW6 950 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 ATXN3LQ9H3M9 355 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 NDFIP2Q9NV92 336 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 STOML1Q9UBI4 398 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 SFMBT1Q9UHJ3 866 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 E9PBE3 544 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 G3V2L1 256 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 ZNF195O14628 629 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 KLHL41O60662 606 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 ITGB1P05556 798 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 C2P06681 752 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 ATP6V1C1P21283 382 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 RPL9P32969 192 aaKnown RBP11.74□□□□□ -0.53
C11orf54-214ENST00000540113 SPRP35270 261 aaPredicted RBP11.74□□□□□ -0.53
C11orf54-214ENST00000540113 CPOXP36551 454 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 THPOP40225 353 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 LIMK2P53671 638 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 EPHB1P54762 984 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 CAP1Q01518 475 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 GRM3Q14832 879 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 ARL13BQ3SXY8 428 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 SLC9B1Q4ZJI4 515 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 C1orf146Q5VVC0 180 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 URGCPQ8TCY9 931 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 PGAP3Q96FM1 320 aaPredicted RBP11.74□□□□□ -0.53
C11orf54-214ENST00000540113 TTC1Q99614 292 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 NAT9Q9BTE0 207 aa11.74□□□□□ -0.53
C11orf54-214ENST00000540113 CSNK1G1Q9HCP0 422 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms