RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 HYAL1Q12794 435 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 PDIA2Q13087 525 aaKnown RBP7.05□□□□□ -1.28
CDH19-203ENST00000540086 ZNF177Q13360 481 aaPredicted RBP7.05□□□□□ -1.28
CDH19-203ENST00000540086 SERINC3Q13530 473 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 HIF1AQ16665 826 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 KYNUQ16719 465 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 PARP6Q2NL67 630 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 BBS9Q3SYG4 887 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 PARP15Q460N3 678 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 C6orf118Q5T5N4 469 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 TPGS1Q6ZTW0 290 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 CHST9Q7L1S5 443 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 OTOP3Q7RTS5 596 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 LRRC49Q8IUZ0 686 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 ANKMY2Q8IV38 441 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 IQCKQ8N0W5 287 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 CARNMT1Q8N4J0 409 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 PDCD7Q8N8D1 485 aaKnown RBP7.05□□□□□ -1.28
CDH19-203ENST00000540086 TDRD5Q8NAT2 981 aaKnown RBP7.05□□□□□ -1.28
CDH19-203ENST00000540086 HJURPQ8NCD3 748 aaPredicted RBP7.05□□□□□ -1.28
CDH19-203ENST00000540086 ARHGEF2Q92974 986 aaKnown RBP7.05□□□□□ -1.28
CDH19-203ENST00000540086 PPP2R3CQ969Q6 453 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 EXOC4Q96A65 974 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 TMA16Q96EY4 203 aaKnown RBP7.05□□□□□ -1.28
CDH19-203ENST00000540086 C9orf72Q96LT7 481 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 TEKT5Q96M29 485 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 CDCA3Q99618 268 aaPredicted RBP7.05□□□□□ -1.28
CDH19-203ENST00000540086 SPON2Q9BUD6 331 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 FOXP3Q9BZS1 431 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 TSPYL1Q9H0U9 437 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 GBA3Q9H227 469 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 PABPC3Q9H361 631 aaKnown RBP7.05□□□□□ -1.28
CDH19-203ENST00000540086 SP110Q9HB58 689 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 TDP1Q9NUW8 608 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 RBM22Q9NW64 420 aaKnown RBP eCLIP7.05□□□□□ -1.28
CDH19-203ENST00000540086 PLK2Q9NYY3 685 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 NINJ2Q9NZG7 142 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 UBP1Q9NZI7 540 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 IGSF9Q9P2J2 1179 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 TRHDEQ9UKU6 1024 aa7.05□□□□□ -1.28
CDH19-203ENST00000540086 E2F8A0AVK6 867 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 H0Y626 953 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 AGPSO00116 658 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 SMAPO00193 183 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 RIPK2O43353 540 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 NEBLO76041 1014 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 SHBGP04278 402 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 HLA-DQB2P05538 268 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 TPSB2P20231 275 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 GLDCP23378 1020 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 ETFBP38117 255 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 MAGEA4P43358 317 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 MAGEA6P43360 314 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 YBEYP58557 167 aaPredicted RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 OLIG2Q13516 323 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 SPARCL1Q14515 664 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 SLC29A2Q14542 456 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 TPSAB1Q15661 275 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 FSCBQ5H9T9 825 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 TTC39BQ5VTQ0 682 aaPredicted RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 RNF219Q5W0B1 726 aaPredicted RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 ALS2CLQ60I27 953 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 DENND2CQ68D51 928 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 IL31Q6EBC2 164 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 ITPRIPL1Q6GPH6 555 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 CXorf57Q6NSI4 855 aaKnown RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 TIGD7Q6NT04 549 aaPredicted RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 CAPN12Q6ZSI9 719 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 CENPUQ71F23 418 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 ZNF534Q76KX8 674 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 TRMT10CQ7L0Y3 403 aaKnown RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 FAM217AQ8IXS0 508 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 ZBED8Q8IZ13 594 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 PDIK1LQ8N165 341 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 SPDYE1Q8NFV5 336 aaPredicted RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 WFDC5Q8TCV5 224 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 DDI1Q8WTU0 396 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 MAML1Q92585 1016 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 SERPINB12Q96P63 405 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 VAT1Q99536 393 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 IL12RB2Q99665 862 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 WDR83Q9BRX9 315 aaKnown RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 ACBD3Q9H3P7 528 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 ZNF576Q9H609 170 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 NSUN3Q9H649 340 aaKnown RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 LRRC4CQ9HCJ2 640 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 DZANK1Q9NVP4 752 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 PIH1D1Q9NWS0 290 aaKnown RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 ZNF510Q9Y2H8 683 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 TBC1D30Q9Y2I9 924 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 ACTL7AQ9Y615 435 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 ILVBLA1L0T0 632 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 TYW5A2RUC4 315 aaKnown RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 H3BQF6 201 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 PRAMEF11O60813 436 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 TTC4O95801 387 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 HOXD9P28356 352 aaPredicted RBP7.04□□□□□ -1.28
CDH19-203ENST00000540086 IL10RBQ08334 325 aa7.04□□□□□ -1.28
CDH19-203ENST00000540086 SLC10A7Q0GE19 358 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms