RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 PSMD3O43242 534 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 JCHAINP01591 159 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 GABRR2P28476 465 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 CORO1AP31146 461 aaKnown RBP17.24■□□□□ 0.35
COPS3-212ENST00000539941 HOXA9P31269 272 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 SMAD3P84022 425 aaKnown RBP17.24■□□□□ 0.35
COPS3-212ENST00000539941 ADGRF1Q5T601 910 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 ZNF534Q76KX8 674 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 TFAP2DQ7Z6R9 452 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 DENND1CQ8IV53 801 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 PALM2Q8IXS6 379 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 KLHDC8BQ8IXV7 354 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 RIBC1Q8N443 379 aaPredicted RBP17.24■□□□□ 0.35
COPS3-212ENST00000539941 BCAS4Q8TDM0 211 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 MAML1Q92585 1016 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 TGS1Q96RS0 853 aaKnown RBP17.24■□□□□ 0.35
COPS3-212ENST00000539941 CEP41Q9BYV8 373 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 VPS37BQ9H9H4 285 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 TRPC7Q9HCX4 862 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 FETUBQ9UGM5 382 aa17.24■□□□□ 0.35
COPS3-212ENST00000539941 IPO11Q9UI26 975 aaKnown RBP17.24■□□□□ 0.35
COPS3-212ENST00000539941 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.24■□□□□ 0.35
COPS3-212ENST00000539941 GOLGA6L7A0A1B0GV03 622 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 RASA4BC9J798 803 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 RGS16O15492 202 aaPredicted RBP17.23■□□□□ 0.35
COPS3-212ENST00000539941 ZBTB24O43167 697 aaPredicted RBP17.23■□□□□ 0.35
COPS3-212ENST00000539941 RASA4O43374 803 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 CACNG3O60359 315 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 RAMP2O60895 175 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 SUN1O94901 812 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 KLKB1P03952 638 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 GSTA2P09210 222 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 SLC6A4P31645 630 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 CD68P34810 354 aaPredicted RBP17.23■□□□□ 0.35
COPS3-212ENST00000539941 IFNAR2P48551 515 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 CDH4P55283 916 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 PRPSAP1Q14558 356 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 EMC10Q5UCC4 262 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 TTC39BQ5VTQ0 682 aaPredicted RBP17.23■□□□□ 0.35
COPS3-212ENST00000539941 LRRC8BQ6P9F7 803 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 ARHGAP36Q6ZRI8 547 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 GAREM2Q75VX8 874 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 CHST9Q7L1S5 443 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 ANKMY2Q8IV38 441 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 PDCD7Q8N8D1 485 aaKnown RBP17.23■□□□□ 0.35
COPS3-212ENST00000539941 MICAL1Q8TDZ2 1067 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 ZFRQ96KR1 1074 aaKnown RBP17.23■□□□□ 0.35
COPS3-212ENST00000539941 WDR83Q9BRX9 315 aaKnown RBP17.23■□□□□ 0.35
COPS3-212ENST00000539941 ASAH2Q9NR71 780 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 GKN1Q9NS71 199 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 PCDHA11Q9Y5I1 949 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 CAPN7Q9Y6W3 813 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 NYNRINQ9P2P1 1898 aaKnown RBP17.23■□□□□ 0.35
COPS3-212ENST00000539941 GRM6O15303 877 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 BANF1O75531 89 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 AP2A1O95782 977 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 AGTP01019 485 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 HDCP19113 662 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 ELK3P41970 407 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 GPX6P59796 221 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 ERVK-21P61565 698 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 SLC7A9P82251 487 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 HP1BP3Q5SSJ5 553 aaPredicted RBP17.23■□□□□ 0.35
COPS3-212ENST00000539941 SYCP2LQ5T4T6 812 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 FBXW10Q5XX13 1052 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 KCTD16Q68DU8 428 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 TDRPQ86YL5 185 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 EPS8L3Q8TE67 593 aaKnown RBP17.23■□□□□ 0.35
COPS3-212ENST00000539941 TLCD1Q96CP7 247 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 HMCESQ96FZ2 354 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 AGAP3Q96P47 875 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 ACTR5Q9H9F9 607 aaPredicted RBP17.23■□□□□ 0.35
COPS3-212ENST00000539941 DPP7Q9UHL4 492 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 AGO1Q9UL18 857 aaKnown RBP17.23■□□□□ 0.35
COPS3-212ENST00000539941 CHMP2BQ9UQN3 213 aa17.23■□□□□ 0.35
COPS3-212ENST00000539941 TLDC2A0PJX2 215 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 ANKRD65E5RJM6 399 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 CDH16O75309 829 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 CLDN11O75508 207 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 NFKB1P19838 968 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 ATP5DP30049 168 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 OR1E1P30953 314 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 MMP13P45452 471 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 EPHA5P54756 1037 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 CAMK1Q14012 370 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 HNRNPDQ14103 355 aaKnown RBP17.22■□□□□ 0.35
COPS3-212ENST00000539941 POLD3Q15054 466 aaPredicted RBP17.22■□□□□ 0.35
COPS3-212ENST00000539941 RASA2Q15283 850 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 LONRF1Q17RB8 773 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 TNFAIP8L3Q5GJ75 292 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 FAM182AQ5T1J6 154 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 TXNDC8Q6A555 127 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 CNTD1Q8N815 330 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 ARL14EPQ8N8R7 260 aaPredicted RBP17.22■□□□□ 0.35
COPS3-212ENST00000539941 FCRL5Q96RD9 977 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 LGALS13Q9UHV8 139 aa17.22■□□□□ 0.35
COPS3-212ENST00000539941 AAR2Q9Y312 384 aaKnown RBP17.22■□□□□ 0.35
COPS3-212ENST00000539941 EXOC1LA0A1B0GW35 172 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 SOBPA7XYQ1 873 aa17.21■□□□□ 0.35
COPS3-212ENST00000539941 AP3B1O00203 1094 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms