RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 STYXL1Q9Y6J8 313 aa7.85□□□□□ -1.15
CCDC60-204ENST00000539847 COPEO14579 308 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 SLC22A2O15244 555 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 CHADO15335 359 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 ZSCAN9O15535 394 aaPredicted RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 DHX15O43143 795 aaKnown RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 EXTL3O43909 919 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 ZNF862O60290 1169 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 RNASEH1O60930 286 aaKnown RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 KRT38O76015 456 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 C4BPAP04003 597 aaKnown RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 ITGB1P05556 798 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 ITGA2BP08514 1039 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 UBTFL6P0CB48 400 aaPredicted RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 FAM200BP0CF97 657 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 CCDC130P13994 396 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 ALOX15P16050 662 aaPredicted RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 AMPD1P23109 780 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 PRKCHP24723 683 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 ADSLP30566 484 aaPredicted RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 RPL22P35268 128 aaKnown RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 RANBP1P43487 201 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 JAK3P52333 1124 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 ZNF132P52740 706 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 NOP14P78316 857 aaKnown RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 MRPS6P82932 125 aaKnown RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 SERINC3Q13530 473 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 MYBPC3Q14896 1274 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 FASTKD3Q14CZ7 662 aaKnown RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 GRIK4Q16099 956 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 HADHQ16836 314 aaKnown RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 KCTD19Q17RG1 926 aaPredicted RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 HSF5Q4G112 596 aaPredicted RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 OGFRL1Q5TC84 451 aaPredicted RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 ZFP1Q6P2D0 407 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 UGT2A3Q6UWM9 527 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 TMEM184AQ6ZMB5 413 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 LRRC69Q6ZNQ3 347 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 LYSMD3Q7Z3D4 306 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 ZNF438Q7Z4V0 828 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 SPATA24Q86W54 205 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 CBWD2Q8IUF1 395 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 MCUQ8NE86 351 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 FBXO36Q8NEA4 188 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 CPA5Q8WXQ8 436 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 SUSD6Q92537 303 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 HAUS1Q96CS2 278 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 CMTM5Q96DZ9 223 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 PRICKLE1Q96MT3 831 aaPredicted RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 MRPS26Q9BYN8 205 aaKnown RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 NEUROD4Q9HD90 331 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 FBXO6Q9NRD1 293 aaPredicted RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 CLEC1BQ9P126 229 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 SLC17A7Q9P2U7 560 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 VPS28Q9UK41 221 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 APOBEC2Q9Y235 224 aaKnown RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 LZTS1Q9Y250 596 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 UBIAD1Q9Y5Z9 338 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 MRPL42Q9Y6G3 142 aaKnown RBP7.84□□□□□ -1.15
CCDC60-204ENST00000539847 TEX264Q9Y6I9 313 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 SPTBN4Q9H254 2564 aa7.84□□□□□ -1.15
CCDC60-204ENST00000539847 GVINP1Q7Z2Y8 2422 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 NLRC5Q86WI3 1866 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 C3orf70A6NLC5 250 aaPredicted RBP7.83□□□□□ -1.16
CCDC60-204ENST00000539847 FIGNL2A6NMB9 653 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 PROB1E7EW31 1015 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 M0QZ92 97 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 SGK1O00141 431 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 LDHAP00338 332 aaKnown RBP7.83□□□□□ -1.16
CCDC60-204ENST00000539847 PIGRP01833 764 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 KRT1P04264 644 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 BPGMP07738 259 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 ZCCHC18P0CG32 403 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 SRGAP2BP0DMP2 458 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 ARP10275 920 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 IDO1P14902 403 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 KCNA2P16389 499 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 HOXB8P17481 243 aaPredicted RBP7.83□□□□□ -1.16
CCDC60-204ENST00000539847 DESP17661 470 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 BGNP21810 368 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 GRK2P25098 689 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 MSX1P28360 303 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 TCF7P36402 384 aaPredicted RBP7.83□□□□□ -1.16
CCDC60-204ENST00000539847 SLC26A2P50443 739 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 PSMC5P62195 406 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 ADCY1Q08828 1119 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 TCF15Q12870 199 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 OVGP1Q12889 678 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 STX3Q13277 289 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 NAB1Q13506 487 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 CUL2Q13617 745 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 DPYSL3Q14195 570 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 PDK3Q15120 406 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 INSCQ1MX18 579 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 TEX44Q53QW1 395 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 ARSJQ5FYB0 599 aaPredicted RBP7.83□□□□□ -1.16
CCDC60-204ENST00000539847 FNBP1LQ5T0N5 605 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 MARCH8Q5T0T0 291 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 SLFN12LQ6IEE8 588 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 MRPL14Q6P1L8 145 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms