RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 GSCP56915 257 aaPredicted RBP17.21■□□□□ 0.35
DDB1-215ENST00000539712 ATP11AP98196 1134 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 ANO6Q4KMQ2 910 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 LAYNQ6UX15 382 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 DBX2Q6ZNG2 339 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 TFAP2DQ7Z6R9 452 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 SETD3Q86TU7 594 aaPredicted RBP17.21■□□□□ 0.35
DDB1-215ENST00000539712 PHF13Q86YI8 300 aaPredicted RBP17.21■□□□□ 0.35
DDB1-215ENST00000539712 GANCQ8TET4 914 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 BPIFA3Q9BQP9 254 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 SYT11Q9BT88 431 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 SLC32A1Q9H598 525 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 GAREM1Q9H706 876 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 VPS51Q9UID3 782 aa17.21■□□□□ 0.35
DDB1-215ENST00000539712 FAM47DPA6NHR8 397 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 RNF103O00237 685 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 PLK4O00444 970 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 WNT9AO14904 365 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 MCF2LO15068 1137 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 SMAD6O43541 496 aaKnown RBP17.2■□□□□ 0.34
DDB1-215ENST00000539712 SRGAP2O75044 1071 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 CBFA2T3O75081 653 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 ZMPSTE24O75844 475 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 ADH1BP00325 375 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 IL1BP01584 269 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 RHOCP08134 193 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 SRCP12931 536 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 RFC1P35251 1148 aaPredicted RBP17.2■□□□□ 0.34
DDB1-215ENST00000539712 ADRA1BP35368 520 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 GRIA4P48058 902 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 ADPRHP54922 357 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 ACBD5Q5T8D3 534 aaPredicted RBP17.2■□□□□ 0.34
DDB1-215ENST00000539712 MANEALQ5VSG8 457 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 Q6ZVU0 165 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 IRF2BP2Q7Z5L9 587 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 ANKRD20A12PQ8NF67 263 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 OR2T34Q8NGX1 318 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 PCMTD1Q96MG8 357 aaPredicted RBP17.2■□□□□ 0.34
DDB1-215ENST00000539712 OMDQ99983 421 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 MUC3BQ9H195 1237 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 RTN4Q9NQC3 1192 aaKnown RBP17.2■□□□□ 0.34
DDB1-215ENST00000539712 NEU3Q9UQ49 428 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 ANKRD6Q9Y2G4 727 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 SNX11Q9Y5W9 270 aa17.2■□□□□ 0.34
DDB1-215ENST00000539712 A0A1W2PPC4 97 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 FAM72CH0Y354 149 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 ZNF821O75541 412 aaPredicted RBP17.19■□□□□ 0.34
DDB1-215ENST00000539712 ZNF883P0CG24 379 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 SPINK2P20155 84 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 GLDCP23378 1020 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 PTPN9P43378 593 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 HDAC4P56524 1084 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 SIM1P81133 766 aaPredicted RBP17.19■□□□□ 0.34
DDB1-215ENST00000539712 NRG1Q02297 640 aaPredicted RBP17.19■□□□□ 0.34
DDB1-215ENST00000539712 FOXC1Q12948 553 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 ACCSLQ4AC99 568 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 FAM72AQ5TYM5 149 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 FAM72DQ6L9T8 149 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 IL27RAQ6UWB1 636 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 LRRC31Q6UY01 552 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 MON1BQ7L1V2 547 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 FAM72BQ86X60 149 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 OR7D4Q8NG98 312 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 OR2A12Q8NGT7 310 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 BAP1Q92560 729 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 AGPAT1Q99943 283 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 FUCA2Q9BTY2 467 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 ADAM22Q9P0K1 906 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 PPARGC1AQ9UBK2 798 aaKnown RBP17.19■□□□□ 0.34
DDB1-215ENST00000539712 SLC25A13Q9UJS0 675 aa17.19■□□□□ 0.34
DDB1-215ENST00000539712 PLXNA2O75051 1894 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 ILVBLA1L0T0 632 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 LRRC72A6NJI9 287 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 KCNK3O14649 394 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 LATO43561 262 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 RTN2O75298 545 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 WNT1P04628 370 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 CTSLP07711 333 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 KRT3P12035 628 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 OR1E1P30953 314 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 SDC4P31431 198 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 NSFP46459 744 aaKnown RBP17.18■□□□□ 0.34
DDB1-215ENST00000539712 CCR5P51681 352 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 SFSWAPQ12872 951 aaKnown RBP17.18■□□□□ 0.34
DDB1-215ENST00000539712 CDO1Q16878 200 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 AGBL4Q5VU57 503 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 WDR59Q6PJI9 974 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 LINGO4Q6UY18 593 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.18■□□□□ 0.34
DDB1-215ENST00000539712 STRADAQ7RTN6 431 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 NAXDQ8IW45 347 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 DCAF4L2Q8NA75 395 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 C3orf20Q8ND61 904 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 OR14C36Q8NHC7 312 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 OR8D1Q8WZ84 308 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 SLC6A18Q96N87 628 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 C2orf49Q9BVC5 232 aaPredicted RBP17.18■□□□□ 0.34
DDB1-215ENST00000539712 TMEM121BQ9BXQ6 578 aaPredicted RBP17.18■□□□□ 0.34
DDB1-215ENST00000539712 ZYG11BQ9C0D3 744 aa17.18■□□□□ 0.34
DDB1-215ENST00000539712 OSBPL2Q9H1P3 480 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms