RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 DRD1P21728 446 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 CCNCP24863 283 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 GJA4P35212 333 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 GGCXP38435 758 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 GRIA2P42262 883 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 ATP5OP48047 213 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 RENBPP51606 427 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 GRSF1Q12849 480 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLPB-210ENST00000539148 RFTN1Q14699 578 aaPredicted RBP10.47□□□□□ -0.73
CLPB-210ENST00000539148 CASP8Q14790 479 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 FBXO43Q4G163 708 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 ALFQ53S48 1182 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 RNF43Q68DV7 783 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 NCBP2-AS2Q69YL0 99 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 HEATR6Q6AI08 1181 aaKnown RBP10.47□□□□□ -0.73
CLPB-210ENST00000539148 TRIM68Q6AZZ1 485 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 SDE2Q6IQ49 451 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 TRMT11Q7Z4G4 463 aaKnown RBP10.47□□□□□ -0.73
CLPB-210ENST00000539148 CROCCP2Q86T23 111 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 CPNE8Q86YQ8 564 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 GJD3Q8N144 294 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLPB-210ENST00000539148 CCNYQ8ND76 341 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 CCHCR1Q8TD31 782 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 TFB1MQ8WVM0 346 aaKnown RBP10.47□□□□□ -0.73
CLPB-210ENST00000539148 BHMTQ93088 406 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 FATE1Q969F0 183 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 ZFYVE19Q96K21 471 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 CCDC114Q96M63 670 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 LRRC3BQ96PB8 259 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 TSGA13Q96PP4 275 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 P2RY13Q9BPV8 354 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 SPON2Q9BUD6 331 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 PLA2G2FQ9BZM2 168 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 TSPYL1Q9H0U9 437 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 ATP13A1Q9HD20 1204 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 HPS4Q9NQG7 708 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 GDF3Q9NR23 364 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 FAM114A2Q9NRY5 505 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 WNT16Q9UBV4 365 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 AMACRQ9UHK6 382 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 GGA2Q9UJY4 613 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 FBXO10Q9UK96 956 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 FBXL21Q9UKT6 434 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 UTP11Q9Y3A2 253 aaKnown RBP10.47□□□□□ -0.73
CLPB-210ENST00000539148 SNX10Q9Y5X0 201 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 REV3LO60673 3130 aa10.47□□□□□ -0.73
CLPB-210ENST00000539148 TBC1D3BA6NDS4 549 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 RASA4BC9J798 803 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 SPECC1L-ADORA2AF8WAN1 911 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 RASA4O43374 803 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 KDELR3O43731 214 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 CNTN5O94779 1100 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 SRPRAP08240 638 aaKnown RBP10.46□□□□□ -0.73
CLPB-210ENST00000539148 BMP1P13497 986 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 CES1P23141 567 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 CHRNA3P32297 505 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 HSPA9P38646 679 aaKnown RBP10.46□□□□□ -0.73
CLPB-210ENST00000539148 GARSP41250 739 aaKnown RBP10.46□□□□□ -0.73
CLPB-210ENST00000539148 TNFRSF4P43489 277 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 DRG2P55039 364 aaKnown RBP10.46□□□□□ -0.73
CLPB-210ENST00000539148 EIF3EP60228 445 aaKnown RBP10.46□□□□□ -0.73
CLPB-210ENST00000539148 IL10RBQ08334 325 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 GALNT2Q10471 571 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 KLF1Q13351 362 aaPredicted RBP10.46□□□□□ -0.73
CLPB-210ENST00000539148 SERINC3Q13530 473 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 BYSLQ13895 437 aaKnown RBP10.46□□□□□ -0.73
CLPB-210ENST00000539148 NOMO1Q15155 1222 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 PLEKHG6Q3KR16 790 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 DCAF12L1Q5VU92 463 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 DRICH1Q6PGQ1 229 aaPredicted RBP10.46□□□□□ -0.73
CLPB-210ENST00000539148 DARS2Q6PI48 645 aaKnown RBP10.46□□□□□ -0.73
CLPB-210ENST00000539148 ZNF852Q6ZMS4 543 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 CEP128Q6ZU80 1094 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 SYDE1Q6ZW31 735 aaPredicted RBP10.46□□□□□ -0.73
CLPB-210ENST00000539148 GSTA5Q7RTV2 222 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 ETFBKMTQ8IXQ9 262 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 MREGQ8N565 214 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 PQLC3Q8N755 202 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 KDM1BQ8NB78 822 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 ACTL9Q8TC94 416 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 RSAD2Q8WXG1 361 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 HDAC11Q96DB2 347 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 FEM1AQ9BSK4 669 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 LRRC1Q9BTT6 524 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 PRDM6Q9NQX0 595 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 ABCB8Q9NUT2 735 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 PLK2Q9NYY3 685 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 GTSE1Q9NYZ3 720 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 ZNF148Q9UQR1 794 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 DRG1Q9Y295 367 aaKnown RBP10.46□□□□□ -0.73
CLPB-210ENST00000539148 FARP1Q9Y4F1 1045 aaPredicted RBP10.46□□□□□ -0.73
CLPB-210ENST00000539148 PIAS3Q9Y6X2 628 aa10.46□□□□□ -0.73
CLPB-210ENST00000539148 GOLGA6CA6NDK9 693 aa10.45□□□□□ -0.74
CLPB-210ENST00000539148 GOLGA6BA6NDN3 693 aa10.45□□□□□ -0.74
CLPB-210ENST00000539148 CBX4O00257 560 aa10.45□□□□□ -0.74
CLPB-210ENST00000539148 ARNTLO00327 626 aa10.45□□□□□ -0.74
CLPB-210ENST00000539148 ZBTB24O43167 697 aaPredicted RBP10.45□□□□□ -0.74
CLPB-210ENST00000539148 KAT7O95251 611 aa10.45□□□□□ -0.74
CLPB-210ENST00000539148 ASGR2P07307 311 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms