RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 ATP5OP48047 213 aa24.02■■□□□ 1.44
TMEM260-202ENST00000538838 SNX1Q13596 522 aa24.02■■□□□ 1.44
TMEM260-202ENST00000538838 PON2Q15165 354 aa24.02■■□□□ 1.44
TMEM260-202ENST00000538838 MLF2Q15773 248 aaPredicted RBP24.02■■□□□ 1.44
TMEM260-202ENST00000538838 WHAMMP3Q1A5X7 153 aa24.02■■□□□ 1.44
TMEM260-202ENST00000538838 MBLAC2Q68D91 279 aa24.02■■□□□ 1.44
TMEM260-202ENST00000538838 LEKR1Q6ZMV7 388 aa24.02■■□□□ 1.44
TMEM260-202ENST00000538838 SLC35B2Q8TB61 432 aa24.02■■□□□ 1.44
TMEM260-202ENST00000538838 WFIKKN2Q8TEU8 576 aa24.02■■□□□ 1.44
TMEM260-202ENST00000538838 QKIQ96PU8 341 aaKnown RBP eCLIP24.02■■□□□ 1.444e-10■■■■■ 29.8
TMEM260-202ENST00000538838 C2orf49Q9BVC5 232 aaPredicted RBP24.02■■□□□ 1.44
TMEM260-202ENST00000538838 SP110Q9HB58 689 aa24.02■■□□□ 1.44
TMEM260-202ENST00000538838 GOLGA6L10A0A0M3HER8 536 aa24.01■■□□□ 1.43
TMEM260-202ENST00000538838 SHISA7A6NL88 538 aa24.01■■□□□ 1.43
TMEM260-202ENST00000538838 KDELR3O43731 214 aa24.01■■□□□ 1.43
TMEM260-202ENST00000538838 RBP3P10745 1247 aa24.01■■□□□ 1.43
TMEM260-202ENST00000538838 GLULP15104 373 aa24.01■■□□□ 1.43
TMEM260-202ENST00000538838 CTSOP43234 321 aaPredicted RBP24.01■■□□□ 1.43
TMEM260-202ENST00000538838 ARF5P84085 180 aa24.01■■□□□ 1.43
TMEM260-202ENST00000538838 PPIDQ08752 370 aaKnown RBP24.01■■□□□ 1.43
TMEM260-202ENST00000538838 AP1B1Q10567 949 aa24.01■■□□□ 1.43
TMEM260-202ENST00000538838 DMC1Q14565 340 aa24.01■■□□□ 1.43
TMEM260-202ENST00000538838 PRKD1Q15139 912 aaPredicted RBP24.01■■□□□ 1.43
TMEM260-202ENST00000538838 CIPCQ9C0C6 399 aa24.01■■□□□ 1.43
TMEM260-202ENST00000538838 PDFQ9HBH1 243 aa24.01■■□□□ 1.43
TMEM260-202ENST00000538838 HPCAL4Q9UM19 191 aa24.01■■□□□ 1.43
TMEM260-202ENST00000538838 ACTL7AQ9Y615 435 aa24.01■■□□□ 1.43
TMEM260-202ENST00000538838 PRAMEF11O60813 436 aa24■■□□□ 1.43
TMEM260-202ENST00000538838 ZMPSTE24O75844 475 aa24■■□□□ 1.43
TMEM260-202ENST00000538838 APODP05090 189 aa24■■□□□ 1.43
TMEM260-202ENST00000538838 VAV1P15498 845 aa24■■□□□ 1.43
TMEM260-202ENST00000538838 XRCC4Q13426 336 aa24■■□□□ 1.43
TMEM260-202ENST00000538838 TUBB2AQ13885 445 aa24■■□□□ 1.43
TMEM260-202ENST00000538838 CCNG2Q16589 344 aa24■■□□□ 1.43
TMEM260-202ENST00000538838 LINGO4Q6UY18 593 aa24■■□□□ 1.43
TMEM260-202ENST00000538838 TFB1MQ8WVM0 346 aaKnown RBP24■■□□□ 1.43
TMEM260-202ENST00000538838 SORCS1Q8WY21 1168 aa24■■□□□ 1.43
TMEM260-202ENST00000538838 MSANTD3Q96H12 275 aa24■■□□□ 1.43
TMEM260-202ENST00000538838 TUBB2BQ9BVA1 445 aa24■■□□□ 1.43
TMEM260-202ENST00000538838 ARHGEF3Q9NR81 526 aa24■■□□□ 1.43
TMEM260-202ENST00000538838 F5P12259 2224 aa24■■□□□ 1.43
TMEM260-202ENST00000538838 TBC1D3BA6NDS4 549 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 POLR2EP19388 210 aaKnown RBP23.99■■□□□ 1.43
TMEM260-202ENST00000538838 GRIA2P42262 883 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 CKAP4Q07065 602 aaKnown RBP23.99■■□□□ 1.43
TMEM260-202ENST00000538838 PREPLQ4J6C6 727 aaPredicted RBP23.99■■□□□ 1.43
TMEM260-202ENST00000538838 SLC45A4Q5BKX6 768 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 LRRC49Q8IUZ0 686 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 CDKL3Q8IVW4 592 aaPredicted RBP23.99■■□□□ 1.43
TMEM260-202ENST00000538838 EZH1Q92800 747 aaPredicted RBP23.99■■□□□ 1.43
TMEM260-202ENST00000538838 TSGA13Q96PP4 275 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 FRMD8P1Q9BZ68 369 aaPredicted RBP23.99■■□□□ 1.43
TMEM260-202ENST00000538838 FBXL21Q9UKT6 434 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 VCANP13611 3396 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 HACD1B0YJ81 288 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 CD72P21854 359 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 IL10RBQ08334 325 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 BYSLQ13895 437 aaKnown RBP23.99■■□□□ 1.43
TMEM260-202ENST00000538838 OASLQ15646 514 aaKnown RBP23.99■■□□□ 1.43
TMEM260-202ENST00000538838 CYP1B1Q16678 543 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 FAM182AQ5T1J6 154 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 DARS2Q6PI48 645 aaKnown RBP23.99■■□□□ 1.43
TMEM260-202ENST00000538838 SUGP1Q8IWZ8 645 aaKnown RBP23.99■■□□□ 1.43
TMEM260-202ENST00000538838 CCDC13Q8IYE1 715 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 UBALD2Q8IYN6 164 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 C12orf50Q8NA57 414 aaPredicted RBP23.99■■□□□ 1.43
TMEM260-202ENST00000538838 CYB5D2Q8WUJ1 264 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 NKD2Q969F2 451 aaPredicted RBP23.99■■□□□ 1.43
TMEM260-202ENST00000538838 TTC17Q96AE7 1141 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 ACDQ96AP0 544 aa23.99■■□□□ 1.43
TMEM260-202ENST00000538838 RBM12Q9NTZ6 932 aaKnown RBP23.99■■□□□ 1.43
TMEM260-202ENST00000538838 ANTXRLA6NF34 631 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 PHF2O75151 1096 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 CCNCP24863 283 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 RBL1P28749 1068 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 STK19P49842 368 aaPredicted RBP23.98■■□□□ 1.43
TMEM260-202ENST00000538838 C2orf54Q08AI8 447 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 TMEM196Q5HYL7 178 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 FSTL4Q6MZW2 842 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 TIGD7Q6NT04 549 aaPredicted RBP23.98■■□□□ 1.43
TMEM260-202ENST00000538838 TTC27Q6P3X3 843 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 FAM3CQ92520 227 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 MAGOHBQ96A72 148 aaKnown RBP23.98■■□□□ 1.43
TMEM260-202ENST00000538838 RPL10LQ96L21 214 aaKnown RBP23.98■■□□□ 1.43
TMEM260-202ENST00000538838 TMEM121Q9BTD3 319 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 BRD8Q9H0E9 1235 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 HOMER3Q9NSC5 361 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 ELOVL2Q9NXB9 296 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 WNT16Q9UBV4 365 aa23.98■■□□□ 1.43
TMEM260-202ENST00000538838 KRBA1A5PL33 1030 aa23.97■■□□□ 1.43
TMEM260-202ENST00000538838 KCNK1O00180 336 aa23.97■■□□□ 1.43
TMEM260-202ENST00000538838 CD160O95971 181 aa23.97■■□□□ 1.43
TMEM260-202ENST00000538838 PEX11BO96011 259 aa23.97■■□□□ 1.43
TMEM260-202ENST00000538838 KCNJ1P48048 391 aa23.97■■□□□ 1.43
TMEM260-202ENST00000538838 CLCN6P51797 869 aa23.97■■□□□ 1.43
TMEM260-202ENST00000538838 ECT2LQ008S8 904 aa23.97■■□□□ 1.43
TMEM260-202ENST00000538838 EIF4HQ15056 248 aaKnown RBP23.97■■□□□ 1.43
TMEM260-202ENST00000538838 DRICH1Q6PGQ1 229 aaPredicted RBP23.97■■□□□ 1.43
TMEM260-202ENST00000538838 ZNF572Q7Z3I7 529 aaPredicted RBP23.97■■□□□ 1.43
TMEM260-202ENST00000538838 SPATA4Q8NEY3 305 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms