RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 SIPA1Q96FS4 1042 aa14.05□□□□□ -0.16
CD9-208ENST00000538834 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.05□□□□□ -0.16
CD9-208ENST00000538834 SNRNP25Q9BV90 132 aaKnown RBP14.05□□□□□ -0.16
CD9-208ENST00000538834 TRIM5Q9C035 493 aa14.05□□□□□ -0.16
CD9-208ENST00000538834 MAGEH1Q9H213 219 aa14.05□□□□□ -0.16
CD9-208ENST00000538834 BCCIPQ9P287 314 aaKnown RBP eCLIP14.05□□□□□ -0.16
CD9-208ENST00000538834 SCML1Q9UN30 329 aa14.05□□□□□ -0.16
CD9-208ENST00000538834 CACNA1AO00555 2505 aa14.05□□□□□ -0.16
CD9-208ENST00000538834 AKR1B15C9JRZ8 316 aaPredicted RBP14.04□□□□□ -0.16
CD9-208ENST00000538834 SNAP91O60641 907 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 MTA2O94776 668 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 VAV1P15498 845 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 TCF4P15884 667 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 CLCN6P51797 869 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 ST8SIA6P61647 398 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 SLC25A11Q02978 314 aaKnown RBP14.04□□□□□ -0.16
CD9-208ENST00000538834 ELF2Q15723 593 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 EFHC2Q5JST6 749 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 AFMIDQ63HM1 303 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 USP30Q70CQ3 517 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.04□□□□□ -0.16
CD9-208ENST00000538834 PLPP6Q8IY26 295 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 CADM4Q8NFZ8 388 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 C1orf216Q8TAB5 229 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 DNASE2BQ8WZ79 361 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 PRCCQ92733 491 aaPredicted RBP14.04□□□□□ -0.16
CD9-208ENST00000538834 SPACA7Q96KW9 195 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 C2orf49Q9BVC5 232 aaPredicted RBP14.04□□□□□ -0.16
CD9-208ENST00000538834 PACSIN1Q9BY11 444 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 PCED1AQ9H1Q7 454 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 LRRC19Q9H756 370 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 NHEJ1Q9H9Q4 299 aaPredicted RBP14.04□□□□□ -0.16
CD9-208ENST00000538834 SEMA4GQ9NTN9 838 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 NCDNQ9UBB6 729 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 MYO1AQ9UBC5 1043 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 VPS28Q9UK41 221 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 GMEB2Q9UKD1 530 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 PILRBQ9UKJ0 227 aa14.04□□□□□ -0.16
CD9-208ENST00000538834 MCF2LO15068 1137 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 ALOX15BO15296 676 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 SMAD6O43541 496 aaKnown RBP14.03□□□□□ -0.16
CD9-208ENST00000538834 RNF8O76064 485 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 TMEM253P0C7T8 217 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 GLDCP23378 1020 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 CD6P30203 668 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 OXTRP30559 389 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 ACVRL1P37023 503 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 PTGER3P43115 390 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 ARSEP51690 589 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 ZNF135P52742 658 aaPredicted RBP14.03□□□□□ -0.16
CD9-208ENST00000538834 YBEYP58557 167 aaPredicted RBP14.03□□□□□ -0.16
CD9-208ENST00000538834 KRT83P78385 493 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 SPEM2Q0P670 501 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 DLG2Q15700 870 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 DPYSL2Q16555 572 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 SCYL2Q6P3W7 929 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 PGBD3Q8N328 593 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 TEKT4Q8WW24 435 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 TSC1Q92574 1164 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 ISG20Q96AZ6 181 aaKnown RBP14.03□□□□□ -0.16
CD9-208ENST00000538834 KCTD15Q96SI1 283 aaPredicted RBP14.03□□□□□ -0.16
CD9-208ENST00000538834 NUP85Q9BW27 656 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 ARRDC1-AS1Q9H2J1 176 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 TMEM74BQ9NUR3 256 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 UVRAGQ9P2Y5 699 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 INTUQ9ULD6 942 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 PPM1HQ9ULR3 514 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 USP18Q9UMW8 372 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 CYP8B1Q9UNU6 501 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 AP4E1Q9UPM8 1137 aa14.03□□□□□ -0.16
CD9-208ENST00000538834 ARID1BQ8NFD5 2236 aaPredicted RBP14.02□□□□□ -0.16
CD9-208ENST00000538834 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 K7ERQ8 282 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 FGF10O15520 208 aaPredicted RBP14.02□□□□□ -0.17
CD9-208ENST00000538834 FOXD2O60548 495 aaPredicted RBP14.02□□□□□ -0.17
CD9-208ENST00000538834 H2AFZP0C0S5 128 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 EPHB2P29323 1055 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 HOXD12P35452 270 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 DRD3P35462 400 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 ETFBP38117 255 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 MPLP40238 635 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 NNMTP40261 264 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 DPYSQ14117 519 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 ELAVL3Q14576 367 aaKnown RBP14.02□□□□□ -0.17
CD9-208ENST00000538834 CST6Q15828 149 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 BOLA3Q53S33 107 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 DAB2IPQ5VWQ8 1189 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 ZNF776Q68DI1 518 aaPredicted RBP14.02□□□□□ -0.17
CD9-208ENST00000538834 TXNRD3NBQ6F5E7 133 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 KIAA1324Q6UXG2 1013 aaKnown RBP14.02□□□□□ -0.17
CD9-208ENST00000538834 H2AFVQ71UI9 128 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 LPCAT2Q7L5N7 544 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 TMEFF1Q8IYR6 380 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 STK40Q8N2I9 435 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 OR2A12Q8NGT7 310 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 ERLEC1Q96DZ1 483 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 TOE1Q96GM8 510 aaKnown RBP14.02□□□□□ -0.17
CD9-208ENST00000538834 EPAS1Q99814 870 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 ORAI3Q9BRQ5 295 aa14.02□□□□□ -0.17
CD9-208ENST00000538834 CEP44Q9C0F1 390 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms