RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 FBXL22Q6P050 247 aa15.11■□□□□ 0.01
ATL3-203ENST00000538786 TIFABQ6ZNK6 161 aa15.11■□□□□ 0.01
ATL3-203ENST00000538786 ZNF461Q8TAF7 563 aa15.11■□□□□ 0.01
ATL3-203ENST00000538786 LRRC8CQ8TDW0 803 aa15.11■□□□□ 0.01
ATL3-203ENST00000538786 CERS2Q96G23 380 aa15.11■□□□□ 0.01
ATL3-203ENST00000538786 ZNF419Q96HQ0 510 aaPredicted RBP15.11■□□□□ 0.01
ATL3-203ENST00000538786 ZNF558Q96NG5 402 aa15.11■□□□□ 0.01
ATL3-203ENST00000538786 IL22Q9GZX6 179 aa15.11■□□□□ 0.01
ATL3-203ENST00000538786 VPS11Q9H270 941 aa15.11■□□□□ 0.01
ATL3-203ENST00000538786 WBP1LQ9NX94 342 aa15.11■□□□□ 0.01
ATL3-203ENST00000538786 MKS1Q9NXB0 559 aa15.11■□□□□ 0.01
ATL3-203ENST00000538786 UBP1Q9NZI7 540 aa15.11■□□□□ 0.01
ATL3-203ENST00000538786 SLC17A7Q9P2U7 560 aa15.11■□□□□ 0.01
ATL3-203ENST00000538786 USP15Q9Y4E8 981 aaPredicted RBP15.11■□□□□ 0.01
ATL3-203ENST00000538786 COL4A6Q14031 1691 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 FAM237BA0A1B0GVD1 139 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 ANKRD65E5RJM6 399 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 C2CD2LO14523 706 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 COPEO14579 308 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 USP1O94782 785 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 ABLIM3O94929 683 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 DHRS4L1P0CG22 281 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 C1QTNF8P60827 252 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 DNAJC3Q13217 504 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 ALFQ53S48 1182 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 SPOUT1Q5T280 376 aaKnown RBP15.1■□□□□ 0.01
ATL3-203ENST00000538786 RNF187Q5TA31 235 aaPredicted RBP15.1■□□□□ 0.01
ATL3-203ENST00000538786 TPGS2Q68CL5 300 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 CCDC121Q6ZUS5 278 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 SPATA21Q7Z572 469 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 TFAP2DQ7Z6R9 452 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 SLC39A11Q8N1S5 342 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.1■□□□□ 0.01
ATL3-203ENST00000538786 IGSF8Q969P0 613 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 FCRL3Q96P31 734 aaPredicted RBP15.1■□□□□ 0.01
ATL3-203ENST00000538786 PITPNM3Q9BZ71 974 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 RBM22Q9NW64 420 aaKnown RBP eCLIP15.1■□□□□ 0.01
ATL3-203ENST00000538786 DNMT3LQ9UJW3 386 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 MRPL42Q9Y6G3 142 aaKnown RBP15.1■□□□□ 0.01
ATL3-203ENST00000538786 MICAL3Q7RTP6 2002 aa15.1■□□□□ 0.01
ATL3-203ENST00000538786 MYO1CO00159 1063 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 CNTN5O94779 1100 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 HLA-DQB2P05538 268 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 ATP5C1P36542 298 aaKnown RBP15.09■□□□□ 0.01
ATL3-203ENST00000538786 ETV4P43268 484 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 GEMP55040 296 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 DSG1Q02413 1049 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 HNRNPDQ14103 355 aaKnown RBP15.09■□□□□ 0.01
ATL3-203ENST00000538786 ANKRD20A4Q4UJ75 823 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 CERCAMQ5T4B2 595 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 MROH9Q5TGP6 573 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 CES3Q6UWW8 571 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 PACS1Q6VY07 963 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 RASSF3Q86WH2 238 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 ANKLE1Q8NAG6 615 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 SPATA22Q8NHS9 363 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 TMEM169Q96HH4 297 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 ZNF512Q96ME7 567 aaPredicted RBP15.09■□□□□ 0.01
ATL3-203ENST00000538786 RPRD1AQ96P16 312 aaPredicted RBP15.09■□□□□ 0.01
ATL3-203ENST00000538786 SRPK1Q96SB4 655 aaKnown RBP15.09■□□□□ 0.01
ATL3-203ENST00000538786 APOL2Q9BQE5 337 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 RC3H2Q9HBD1 1191 aaKnown RBP15.09■□□□□ 0.01
ATL3-203ENST00000538786 ZFATQ9P243 1243 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 ZCWPW2A0A1B0GU75 182 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 NEBLO76041 1014 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 SEC24AO95486 1093 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 PEX11BO96011 259 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 RENBPP51606 427 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 CGB2Q6NT52 195 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 CHSY1Q86X52 802 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 SPOCK2Q92563 424 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 ZNF75CPQ92670 426 aaPredicted RBP15.09■□□□□ 0.01
ATL3-203ENST00000538786 ZNF669Q96BR6 464 aaPredicted RBP15.09■□□□□ 0.01
ATL3-203ENST00000538786 HMCESQ96FZ2 354 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 TBL1YQ9BQ87 522 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 HERC2P3Q9BVR0 1158 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 IQCGQ9H095 443 aaKnown RBP15.09■□□□□ 0.01
ATL3-203ENST00000538786 C12orf65Q9H3J6 166 aaKnown RBP15.09■□□□□ 0.01
ATL3-203ENST00000538786 ZNF212Q9UDV6 495 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 SOX13Q9UN79 622 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 STARD13Q9Y3M8 1113 aa15.09■□□□□ 0.01
ATL3-203ENST00000538786 CARNS1A5YM72 827 aa15.08■□□□□ 0
ATL3-203ENST00000538786 ZNF840PA6NDX5 716 aa15.08■□□□□ 0
ATL3-203ENST00000538786 ATP9BO43861 1147 aa15.08■□□□□ 0
ATL3-203ENST00000538786 MT-CYBP00156 380 aaPredicted RBP15.08■□□□□ 0
ATL3-203ENST00000538786 ERVK-10P10266 1014 aa15.08■□□□□ 0
ATL3-203ENST00000538786 HMGA1P17096 107 aaKnown RBP15.08■□□□□ 0
ATL3-203ENST00000538786 NADSYN1Q6IA69 706 aa15.08■□□□□ 0
ATL3-203ENST00000538786 KLHDC10Q6PID8 442 aa15.08■□□□□ 0
ATL3-203ENST00000538786 FAM47EQ6ZV65 393 aa15.08■□□□□ 0
ATL3-203ENST00000538786 CMTR2Q8IYT2 770 aaKnown RBP15.08■□□□□ 0
ATL3-203ENST00000538786 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.08■□□□□ 0
ATL3-203ENST00000538786 CCT6BQ92526 530 aa15.08■□□□□ 0
ATL3-203ENST00000538786 MYRFLQ96LU7 910 aa15.08■□□□□ 0
ATL3-203ENST00000538786 FAM111AQ96PZ2 611 aa15.08■□□□□ 0
ATL3-203ENST00000538786 PLCD4Q9BRC7 762 aa15.08■□□□□ 0
ATL3-203ENST00000538786 C11orf49Q9H6J7 331 aa15.08■□□□□ 0
ATL3-203ENST00000538786 TXNDC16Q9P2K2 825 aa15.08■□□□□ 0
ATL3-203ENST00000538786 PRKAG3Q9UGI9 489 aa15.08■□□□□ 0
ATL3-203ENST00000538786 PHTF1Q9UMS5 762 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms