RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 ZNF487B1APH4 448 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 ACAT1P24752 427 aaKnown RBP14.36□□□□□ -0.11
CLPB-209ENST00000538039 GRIA4P48058 902 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 NAGLUP54802 743 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 SOX4Q06945 474 aaPredicted RBP14.36□□□□□ -0.11
CLPB-209ENST00000538039 NSUN2Q08J23 767 aaKnown RBP eCLIP14.36□□□□□ -0.11
CLPB-209ENST00000538039 TSTD2Q5T7W7 516 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 ICA1LQ8NDH6 482 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 BHLHE22Q8NFJ8 381 aaPredicted RBP14.36□□□□□ -0.11
CLPB-209ENST00000538039 HMGCLL1Q8TB92 370 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 CPNE1Q99829 537 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 RBM38Q9H0Z9 239 aaKnown RBP14.36□□□□□ -0.11
CLPB-209ENST00000538039 NMRAL1Q9HBL8 299 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 TMEM30AQ9NV96 361 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 OXSMQ9NWU1 459 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 STK39Q9UEW8 545 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 SLC39A10Q9ULF5 831 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 PSMD13Q9UNM6 376 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 TLL2Q9Y6L7 1015 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 NRP1O14786 923 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 RNASEH2AO75792 299 aaKnown RBP14.36□□□□□ -0.11
CLPB-209ENST00000538039 PIGNO95427 931 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 TFEBP19484 476 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 RPS12P25398 132 aaKnown RBP14.36□□□□□ -0.11
CLPB-209ENST00000538039 GLUD2P49448 558 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 CSRP3P50461 194 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 DPYSQ14117 519 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 KIAA0319Q5VV43 1072 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 KLHDC10Q6PID8 442 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 ARHGAP22Q7Z5H3 698 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 DEFB132Q7Z7B7 95 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 PIGZQ86VD9 579 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 ANKRD52Q8NB46 1076 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 AP4B1Q9Y6B7 739 aa14.36□□□□□ -0.11
CLPB-209ENST00000538039 DCLK1O15075 740 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 STAU1O95793 577 aaKnown RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 ENO3P13929 434 aaPredicted RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 MATKP42679 507 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 TNFAIP2Q03169 654 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 DBN1Q16643 649 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 GRTP1Q5TC63 336 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 PAQR9Q6ZVX9 377 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 OSTM1Q86WC4 334 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 MARVELD2Q8N4S9 558 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 SLC7A14Q8TBB6 771 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 KCTD4Q8WVF5 259 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 JADE3Q92613 823 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 SENP6Q9GZR1 1112 aaPredicted RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 ERAP1Q9NZ08 941 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 VANGL2Q9ULK5 521 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 MTF2Q9Y483 593 aaPredicted RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 ZSWIM8A7E2V4 1837 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 C7orf72A4D263 438 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 FZD9O00144 591 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 DENRO43583 198 aaKnown RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 PEX1O43933 1283 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 TRIM13O60858 407 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 ZFXP17010 805 aaPredicted RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 MX2P20592 715 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 RPL34P49207 117 aaKnown RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 BST2Q10589 180 aaKnown RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 DALRD3Q5D0E6 543 aaKnown RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 NOL9Q5SY16 702 aaKnown RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 C9orf57Q5W0N0 161 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 KCTD11Q693B1 232 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 C4orf22Q6V702 233 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 CEP97Q8IW35 865 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 CENPLQ8N0S6 344 aaPredicted RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLPB-209ENST00000538039 AFG1LQ8WV93 481 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 OTUD5Q96G74 571 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 C16orf70Q9BSU1 422 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 FTHL17Q9BXU8 183 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 PCDHAC1Q9H158 963 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 EIF2B3Q9NR50 452 aaKnown RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 TXNDC16Q9P2K2 825 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 GNEQ9Y223 722 aaKnown RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 COMMD3-BMI1R4GMX3 469 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 MYLKQ15746 1914 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 TSC2P49815 1807 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 NEMP2A6NFY4 417 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 AP1G1O43747 822 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 ARL4AP40617 200 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 PDCD2Q16342 344 aaPredicted RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 SLC25A52Q3SY17 297 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 ARHGAP17Q68EM7 881 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 VPS39Q96JC1 886 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 ACE2Q9BYF1 805 aaPredicted RBP14.35□□□□□ -0.11
CLPB-209ENST00000538039 SEMA6AQ9H2E6 1030 aa14.35□□□□□ -0.11
CLPB-209ENST00000538039 TCAF2A6NFQ2 919 aa14.34□□□□□ -0.11
CLPB-209ENST00000538039 M0QYT0 321 aa14.34□□□□□ -0.11
CLPB-209ENST00000538039 ACOT8O14734 319 aa14.34□□□□□ -0.11
CLPB-209ENST00000538039 ZBTB7AO95365 584 aa14.34□□□□□ -0.11
CLPB-209ENST00000538039 MYL4P12829 197 aa14.34□□□□□ -0.11
CLPB-209ENST00000538039 ERCC2P18074 760 aa14.34□□□□□ -0.11
CLPB-209ENST00000538039 IFRD2Q12894 506 aaPredicted RBP14.34□□□□□ -0.11
CLPB-209ENST00000538039 FLOT2Q14254 428 aa14.34□□□□□ -0.11
CLPB-209ENST00000538039 CCDC153Q494R4 210 aa14.34□□□□□ -0.11
CLPB-209ENST00000538039 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.34□□□□□ -0.11
CLPB-209ENST00000538039 IFNLR1Q8IU57 520 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms