RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 NDE1Q9NXR1 346 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 TMEM216Q9P0N5 145 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 TAGLN3Q9UI15 199 aa13.14□□□□□ -0.31
TRIM25-202ENST00000537230 A0A1B0GVG6 124 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 C9IYK1 514 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 M0QZ92 97 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 ATP9BO43861 1147 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 PLIN3O60664 434 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 CIB2O75838 187 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 FBXO21O94952 628 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 POLBP06746 335 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 AKR1A1P14550 325 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 GJA9P57773 515 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 PPIDQ08752 370 aaKnown RBP13.13□□□□□ -0.31
TRIM25-202ENST00000537230 IRF5Q13568 498 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 PCLAFQ15004 111 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 LRRC36Q1X8D7 754 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 CD300LGQ6UXG3 332 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 NET1Q7Z628 596 aaPredicted RBP13.13□□□□□ -0.31
TRIM25-202ENST00000537230 TNS4Q8IZW8 715 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 DNAAF3Q8N9W5 541 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 OR10T2Q8NGX3 314 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 ZSCAN18Q8TBC5 510 aaPredicted RBP13.13□□□□□ -0.31
TRIM25-202ENST00000537230 TRAPPC9Q96Q05 1148 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 WWP1Q9H0M0 922 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 CAB39LQ9H9S4 337 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 CHRAC1Q9NRG0 131 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 ETAA1Q9NY74 926 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 VANGL2Q9ULK5 521 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 Q9Y3F1 56 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 ZCWPW2A0A1B0GU75 182 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 AP2A1O95782 977 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 SRGAP2BP0DMP2 458 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 DSG1Q02413 1049 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 CDC16Q13042 620 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 STX3Q13277 289 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 TRMT5Q32P41 509 aaKnown RBP13.13□□□□□ -0.31
TRIM25-202ENST00000537230 KCTD11Q693B1 232 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 MYLK4Q86YV6 388 aaPredicted RBP13.13□□□□□ -0.31
TRIM25-202ENST00000537230 C10orf107Q8IVU9 208 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 TMEM86AQ8N2M4 240 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 USP33Q8TEY7 942 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 ZFAND2BQ8WV99 257 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 CDKL2Q92772 493 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 APBB2Q92870 758 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 SMARCD1Q96GM5 515 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 ECSITQ9BQ95 431 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 NUDT5Q9UKK9 219 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 INPP5FQ9Y2H2 1132 aa13.13□□□□□ -0.31
TRIM25-202ENST00000537230 DUSP11O75319 330 aaKnown RBP13.12□□□□□ -0.31
TRIM25-202ENST00000537230 GARSP41250 739 aaKnown RBP13.12□□□□□ -0.31
TRIM25-202ENST00000537230 CXCR3P49682 368 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 HSP90AA5PQ58FG0 334 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 TEDDM1Q5T9Z0 273 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 C6orf163Q5TEZ5 329 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 OTOP3Q7RTS5 596 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 DCLK2Q8N568 766 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 MOCOSQ96EN8 888 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 CCDC106Q9BWC9 280 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 SIK2Q9H0K1 926 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 CDH9Q9ULB4 789 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 PADI3Q9ULW8 664 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 BIRC5O15392 142 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 JCHAINP01591 159 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 CNTFP26441 200 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 TYK2P29597 1187 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 AP2B1P63010 937 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 SLC25A3Q00325 362 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 RAPH1Q70E73 1250 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 SERINC5Q86VE9 423 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 CRLF3Q8IUI8 442 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 CNTD1Q8N815 330 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 TRIB2Q92519 343 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 DPF3Q92784 378 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 PGAP3Q96FM1 320 aaPredicted RBP13.12□□□□□ -0.31
TRIM25-202ENST00000537230 OXCT2Q9BYC2 517 aaPredicted RBP13.12□□□□□ -0.31
TRIM25-202ENST00000537230 ACSS2Q9NR19 701 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 PDP2Q9P2J9 529 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 PTPRDP23468 1912 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.12□□□□□ -0.31
TRIM25-202ENST00000537230 RNASEH1O60930 286 aaKnown RBP13.12□□□□□ -0.31
TRIM25-202ENST00000537230 THPOP40225 353 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 IRF9Q00978 393 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 CRHR2Q13324 411 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 GSTA3Q16772 222 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 FSTL4Q6MZW2 842 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 KYAT3Q6YP21 454 aaKnown RBP13.12□□□□□ -0.31
TRIM25-202ENST00000537230 MAVSQ7Z434 540 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 STRA8Q7Z7C7 330 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 TMEM135Q86UB9 458 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 SPNS2Q8IVW8 549 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 POU5F2Q8N7G0 328 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 SPATA22Q8NHS9 363 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 DQX1Q8TE96 717 aaKnown RBP13.12□□□□□ -0.31
TRIM25-202ENST00000537230 PYDC1Q8WXC3 89 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 FERMT1Q9BQL6 677 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 MTG1Q9BT17 334 aaPredicted RBP13.12□□□□□ -0.31
TRIM25-202ENST00000537230 CSNK1G1Q9HCP0 422 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 SNX15Q9NRS6 342 aa13.12□□□□□ -0.31
TRIM25-202ENST00000537230 NDFIP2Q9NV92 336 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms