RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CST6Q15828 149 aa18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 LRRC31Q6UY01 552 aa18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 STRADAQ7RTN6 431 aa18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 MMAAQ8IVH4 418 aaKnown RBP18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 STK40Q8N2I9 435 aa18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 PSMB7Q99436 277 aa18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 SELENOOQ9BVL4 669 aa18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 BTBD1Q9H0C5 482 aa18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 PABPC3Q9H361 631 aaKnown RBP18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 SERGEFQ9UGK8 458 aa18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 VPS28Q9UK41 221 aa18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 SCML1Q9UN30 329 aa18.33■□□□□ 0.53
TNFRSF1A-209ENST00000536717 SIGLEC16A6NMB1 481 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 DDX3XO00571 662 aaKnown RBP eCLIP18.33■□□□□ 0.523e-10■■□□□ 12.2
TNFRSF1A-209ENST00000536717 MID1O15344 667 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 AKR1B10O60218 316 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SRGAP2O75044 1071 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 RHOCP08134 193 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 GZMAP12544 262 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ADRA1BP35368 520 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 MAPK8P45983 427 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 HDAC4P56524 1084 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 DAB2IPQ5VWQ8 1189 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ACAD10Q6JQN1 1059 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 USP30Q70CQ3 517 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 TFAP2DQ7Z6R9 452 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SETD3Q86TU7 594 aaPredicted RBP18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 CCDC42Q96M95 316 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 CHP1Q99653 195 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 MUC3BQ9H195 1237 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 PCED1AQ9H1Q7 454 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 NHEJ1Q9H9Q4 299 aaPredicted RBP18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 TAS2R14Q9NYV8 317 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SUSD2Q9UGT4 822 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SLC25A13Q9UJS0 675 aa18.33■□□□□ 0.52
TNFRSF1A-209ENST00000536717 A0A0D9SEW6 157 aa18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ATP9BO43861 1147 aa18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 RNASEH1O60930 286 aaKnown RBP18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SEMA4FO95754 770 aa18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 GPD1P21695 349 aa18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 GFPT1Q06210 699 aaPredicted RBP18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 PPP1R15BQ5SWA1 713 aa18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 MCOLN2Q8IZK6 566 aa18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ZCCHC9Q8N567 271 aaKnown RBP18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 C1orf216Q8TAB5 229 aa18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 FAM172AQ8WUF8 416 aa18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 MAGEB5Q9BZ81 275 aa18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SGK2Q9HBY8 427 aa18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 FBXL12Q9NXK8 326 aa18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 EIF2B4Q9UI10 523 aaKnown RBP18.32■□□□□ 0.52
TNFRSF1A-209ENST00000536717 A0A087X0T9 212 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 A0A1W2PP55 124 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 TMCO5BA8MYB1 307 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ARHGAP33O14559 1287 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SNAP91O60641 907 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 MT-CO1P00395 513 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 FAM228BP0C875 321 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 GNSP15586 552 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 OR1E1P30953 314 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SLC8A1P32418 973 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 RPL7AP62424 266 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 NRG1Q02297 640 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ELAVL3Q14576 367 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 MANEALQ5VSG8 457 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 TMTC1Q8IUR5 882 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SH2D3CQ8N5H7 860 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 CCDC185Q8N715 623 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ZYG11BQ9C0D3 744 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 MIR1-1HGQ9H1L0 117 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 PPARGC1AQ9UBK2 798 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 OR12D3Q9UGF7 316 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 VPS51Q9UID3 782 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 HS3ST2Q9Y278 367 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SLCO1B1Q9Y6L6 691 aa18.31■□□□□ 0.52
TNFRSF1A-209ENST00000536717 A0A1B0GTW7 788 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 FAM72CH0Y354 149 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 RTN2O75298 545 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 RRM1P23921 792 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 PSMD8P48556 350 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 DLG2Q15700 870 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 SLC18A3Q16572 532 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 UAP1L1Q3KQV9 507 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ARL13BQ3SXY8 428 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 ACCSLQ4AC99 568 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 C6orf118Q5T5N4 469 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 FAM72AQ5TYM5 149 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 FAM72DQ6L9T8 149 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 DNAJC24Q6P3W2 148 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 FAM72BQ86X60 149 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 AADATQ8N5Z0 425 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 DCAF4L2Q8NA75 395 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 OR2I1PQ8NGU4 316 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 BIRC7Q96CA5 298 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 MCEEQ96PE7 176 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 BAG1Q99933 345 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 GTPBP2Q9BX10 602 aaKnown RBP18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 OSBPL2Q9H1P3 480 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 NEUROG2Q9H2A3 272 aa18.3■□□□□ 0.52
TNFRSF1A-209ENST00000536717 NEU3Q9UQ49 428 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms