RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 CNTFP26441 200 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 KPNA1P52294 538 aaPredicted RBP23.15■■□□□ 1.3
HMGA2-206ENST00000536545 DEFB103AP81534 67 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 DSG1Q02413 1049 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 MGAT5Q09328 741 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 SNX30Q5VWJ9 437 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 NADSYN1Q6IA69 706 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 KIAA1841Q6NSI8 718 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 TMEM135Q86UB9 458 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 DNAAF3Q8N9W5 541 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 SPOCK2Q92563 424 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 CDKL2Q92772 493 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 FCRL3Q96P31 734 aaPredicted RBP23.15■■□□□ 1.3
HMGA2-206ENST00000536545 DONSONQ9NYP3 566 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 UBP1Q9NZI7 540 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 RPS6KL1Q9Y6S9 549 aa23.15■■□□□ 1.3
HMGA2-206ENST00000536545 GOLGA6L7A0A1B0GV03 622 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 ANKRD65E5RJM6 399 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 USP1O94782 785 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 KIAA0754O94854 1291 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 ABLIM3O94929 683 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 ETV4P43268 484 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 NPY2RP49146 381 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 MTA1Q13330 715 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 LRRC26Q2I0M4 334 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 PACS1Q6VY07 963 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 TMCO2Q7Z6W1 182 aaPredicted RBP23.14■■□□□ 1.3
HMGA2-206ENST00000536545 LINC00523Q86TU6 105 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 PDZD8Q8NEN9 1154 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 HMCESQ96FZ2 354 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 CERS2Q96G23 380 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 PPP1R2P1Q96PQ5 205 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 APOL2Q9BQE5 337 aa23.14■■□□□ 1.3
HMGA2-206ENST00000536545 C12orf65Q9H3J6 166 aaKnown RBP23.14■■□□□ 1.3
HMGA2-206ENST00000536545 AAR2Q9Y312 384 aaKnown RBP23.14■■□□□ 1.3
HMGA2-206ENST00000536545 AP3B1O00203 1094 aa23.14■■□□□ 1.29
HMGA2-206ENST00000536545 ANXA9O76027 345 aa23.14■■□□□ 1.29
HMGA2-206ENST00000536545 CDH17Q12864 832 aa23.14■■□□□ 1.29
HMGA2-206ENST00000536545 ANO4Q32M45 955 aa23.14■■□□□ 1.29
HMGA2-206ENST00000536545 SPOUT1Q5T280 376 aaKnown RBP23.14■■□□□ 1.29
HMGA2-206ENST00000536545 CERCAMQ5T4B2 595 aa23.14■■□□□ 1.29
HMGA2-206ENST00000536545 TIFABQ6ZNK6 161 aa23.14■■□□□ 1.29
HMGA2-206ENST00000536545 RASSF3Q86WH2 238 aa23.14■■□□□ 1.29
HMGA2-206ENST00000536545 ANKS4BQ8N8V4 417 aa23.14■■□□□ 1.29
HMGA2-206ENST00000536545 ANKLE1Q8NAG6 615 aa23.14■■□□□ 1.29
HMGA2-206ENST00000536545 SPATA22Q8NHS9 363 aa23.14■■□□□ 1.29
HMGA2-206ENST00000536545 ZNF669Q96BR6 464 aaPredicted RBP23.14■■□□□ 1.29
HMGA2-206ENST00000536545 IL22Q9GZX6 179 aa23.14■■□□□ 1.29
HMGA2-206ENST00000536545 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.13■■□□□ 1.29
HMGA2-206ENST00000536545 ZCWPW2A0A1B0GU75 182 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 FAM237BA0A1B0GVD1 139 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 HMGA1P17096 107 aaKnown RBP23.13■■□□□ 1.29
HMGA2-206ENST00000536545 DNAJB2P25686 324 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 ITGB8P26012 769 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 DNAJC3Q13217 504 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 TPGS2Q68CL5 300 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 CES3Q6UWW8 571 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 SPATA21Q7Z572 469 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 CHSY1Q86X52 802 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 ZNF461Q8TAF7 563 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 LRRC8CQ8TDW0 803 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 TBL1YQ9BQ87 522 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 RBM22Q9NW64 420 aaKnown RBP eCLIP23.13■■□□□ 1.29
HMGA2-206ENST00000536545 DNMT3LQ9UJW3 386 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 SOX13Q9UN79 622 aa23.13■■□□□ 1.29
HMGA2-206ENST00000536545 USP15Q9Y4E8 981 aaPredicted RBP23.13■■□□□ 1.29
HMGA2-206ENST00000536545 GJA8P48165 433 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 KCNQ1P51787 676 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 SEPT7Q16181 437 aaKnown RBP23.12■■□□□ 1.29
HMGA2-206ENST00000536545 CMTR2Q8IYT2 770 aaKnown RBP23.12■■□□□ 1.29
HMGA2-206ENST00000536545 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.12■■□□□ 1.29
HMGA2-206ENST00000536545 ARMC5Q96C12 935 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 MYEOVQ96EZ4 313 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 TMEM169Q96HH4 297 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 SRPK1Q96SB4 655 aaKnown RBP23.12■■□□□ 1.29
HMGA2-206ENST00000536545 C11orf49Q9H6J7 331 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 YIPF1Q9Y548 306 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 PSAT1Q9Y617 370 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 ZNF840PA6NDX5 716 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 COPEO14579 308 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 MT-CYBP00156 380 aaPredicted RBP23.12■■□□□ 1.29
HMGA2-206ENST00000536545 ERVK-10P10266 1014 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 ADRA1AP35348 466 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 GEMP55040 296 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 WDR5P61964 334 aaKnown RBP23.12■■□□□ 1.29
HMGA2-206ENST00000536545 ANKRD20A4Q4UJ75 823 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 MROH9Q5TGP6 573 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 KLHDC10Q6PID8 442 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 FAM47EQ6ZV65 393 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 GRAMD1AQ96CP6 724 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 RPRD1AQ96P16 312 aaPredicted RBP23.12■■□□□ 1.29
HMGA2-206ENST00000536545 VPS11Q9H270 941 aa23.12■■□□□ 1.29
HMGA2-206ENST00000536545 MAGEB16A2A368 324 aa23.11■■□□□ 1.29
HMGA2-206ENST00000536545 TIMP1P01033 207 aa23.11■■□□□ 1.29
HMGA2-206ENST00000536545 LAG3P18627 525 aa23.11■■□□□ 1.29
HMGA2-206ENST00000536545 TACR2P21452 398 aa23.11■■□□□ 1.29
HMGA2-206ENST00000536545 MAPKAPK2P49137 400 aa23.11■■□□□ 1.29
HMGA2-206ENST00000536545 SF3A3Q12874 501 aaKnown RBP eCLIP23.11■■□□□ 1.29
HMGA2-206ENST00000536545 C5orf22Q49AR2 442 aa23.11■■□□□ 1.29
HMGA2-206ENST00000536545 FAM117BQ6P1L5 589 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms