RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 P2RY11Q96G91 374 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 TCF25Q9BQ70 676 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 CNGB3Q9NQW8 809 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 RBM22Q9NW64 420 aaKnown RBP eCLIP8.4□□□□□ -1.06
ABCA4-207ENST00000536513 DTLQ9NZJ0 730 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 PHF24Q9UPV7 400 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 FIS1Q9Y3D6 152 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 ENTPD5O75356 428 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 DCTN3O75935 186 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 HARS2P49590 506 aaKnown RBP8.4□□□□□ -1.06
ABCA4-207ENST00000536513 SMAD3P84022 425 aaKnown RBP8.4□□□□□ -1.06
ABCA4-207ENST00000536513 BTKQ06187 659 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 TRIM71Q2Q1W2 868 aaKnown RBP8.4□□□□□ -1.06
ABCA4-207ENST00000536513 ANO4Q32M45 955 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 FNBP1LQ5T0N5 605 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 ARHGAP17Q68EM7 881 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 FBXO46Q6PJ61 603 aaPredicted RBP8.4□□□□□ -1.06
ABCA4-207ENST00000536513 PDZD4Q76G19 769 aaPredicted RBP8.4□□□□□ -1.06
ABCA4-207ENST00000536513 KLHL23Q8NBE8 558 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 OR52K1Q8NGK4 314 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 HTR3CQ8WXA8 447 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 TTC17Q96AE7 1141 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 PPP1R36Q96LQ0 422 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 TSEN34Q9BSV6 310 aaKnown RBP8.4□□□□□ -1.06
ABCA4-207ENST00000536513 GRHL1Q9NZI5 618 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 TRPM5Q9NZQ8 1165 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 GGA2Q9UJY4 613 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 SHOC2Q9UQ13 582 aa8.4□□□□□ -1.06
ABCA4-207ENST00000536513 MTMR11A4FU01 709 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 C2orf78A6NCI8 922 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 H0Y626 953 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 GPR37O15354 613 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 TMEM63AO94886 807 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 MGAT1P26572 445 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 NTHL1P78549 312 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 BLMHQ13867 455 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 MAP7D1Q3KQU3 841 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 MSS51Q4VC12 460 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 CWF19L1Q69YN2 538 aaKnown RBP8.4□□□□□ -1.07
ABCA4-207ENST00000536513 BBS12Q6ZW61 710 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 CCDC117Q8IWD4 279 aaPredicted RBP8.4□□□□□ -1.07
ABCA4-207ENST00000536513 FAM210AQ96ND0 272 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 CASD1Q96PB1 797 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 ABCG8Q9H221 673 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 PABPC3Q9H361 631 aaKnown RBP8.4□□□□□ -1.07
ABCA4-207ENST00000536513 LRRC19Q9H756 370 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 OSER1Q9NX31 292 aa8.4□□□□□ -1.07
ABCA4-207ENST00000536513 ATP5HO75947 161 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 GNRH1P01148 92 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 PRKCGP05129 697 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 CST5P28325 142 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 LRRC73Q5JTD7 316 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 PPP1R15BQ5SWA1 713 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 STXBP5Q5T5C0 1151 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 ZDHHC24Q6UX98 284 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 AGGF1Q8N302 714 aaeCLIP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 PQLC3Q8N755 202 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 ZNF669Q96BR6 464 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 RPL10LQ96L21 214 aaKnown RBP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 ZNF570Q96NI8 536 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 MRPL9Q9BYD2 267 aaKnown RBP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 TLR8Q9NR97 1041 aaKnown RBP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 HCFC1R1Q9NWW0 138 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 NINJ2Q9NZG7 142 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 PAIP2BQ9ULR5 123 aaKnown RBP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 SPTBN2O15020 2390 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 CBX6O95503 412 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 LMNAP02545 664 aaKnown RBP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 KITP10721 976 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 CHRNA4P43681 627 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 NCALDP61601 193 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 DSC3Q14574 896 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 SIX1Q15475 284 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 TCEA2Q15560 299 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 FAM109BQ6ICB4 259 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 ANKS3Q6ZW76 656 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 RAPH1Q70E73 1250 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 POLNQ7Z5Q5 900 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 ZNF598Q86UK7 904 aaKnown RBP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 ALLCQ8N6M5 410 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 ZNF366Q8N895 744 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 BLOC1S5Q8TDH9 187 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 MAML1Q92585 1016 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 GORASP1Q9BQQ3 440 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 RSPH9Q9H1X1 276 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-207ENST00000536513 NPHS2Q9NP85 383 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 ABCC13Q9NSE7 274 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 SPG21Q9NZD8 308 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 LOC285556D6RIA3 1793 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 RIPK2O43353 540 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 SNX3O60493 162 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 MTA2O94776 668 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 HAUS5O94927 633 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 NFKB1P19838 968 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 CALB2P22676 271 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 AVPR1AP37288 418 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 VHLP40337 213 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 GLUD2P49448 558 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 EPHB1P54762 984 aa8.39□□□□□ -1.07
ABCA4-207ENST00000536513 COL9A2Q14055 689 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms