RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 CRLF3Q8IUI8 442 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 ATP2A3Q93084 1043 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 FAM149B1Q96BN6 582 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 MRPL1Q9BYD6 325 aaKnown RBP18.31■□□□□ 0.52
RAB40C-203ENST00000535977 MRPS26Q9BYN8 205 aaKnown RBP18.31■□□□□ 0.52
RAB40C-203ENST00000535977 WWP1Q9H0M0 922 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 MYOCOSA0A1B0GUC4 107 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 ARHGAP42A6NI28 874 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 LRPAP1P30533 357 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 CRYBB1P53674 252 aaPredicted RBP18.31■□□□□ 0.52
RAB40C-203ENST00000535977 NAA20P61599 178 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 ADAM17P78536 824 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 PAFAH1B3Q15102 231 aaKnown RBP18.31■□□□□ 0.52
RAB40C-203ENST00000535977 GRAMD1BQ3KR37 738 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 HSF5Q4G112 596 aaPredicted RBP18.31■□□□□ 0.52
RAB40C-203ENST00000535977 DENND5BQ6ZUT9 1274 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 MARVELD2Q8N4S9 558 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 RNF139Q8WU17 664 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 BRI3BPQ8WY22 251 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 BTBD9Q96Q07 612 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 NPY6RQ99463 290 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 LRRC4Q9HBW1 653 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 TMED5Q9Y3A6 229 aa18.31■□□□□ 0.52
RAB40C-203ENST00000535977 SH3PXD2BA1X283 911 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 CAPN8A6NHC0 703 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 FBXO21O94952 628 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 BPGMP07738 259 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 NPR3P17342 541 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 PGAM1P18669 254 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 PAX3P23760 479 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 LILRA4P59901 499 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 CCNIQ14094 377 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 TBCCQ15814 346 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 DCAF6Q58WW2 860 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 MROH9Q5TGP6 573 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 TRMT10BQ6PF06 316 aaKnown RBP18.3■□□□□ 0.52
RAB40C-203ENST00000535977 FAM131BQ86XD5 332 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 GNEQ9Y223 722 aaKnown RBP18.3■□□□□ 0.52
RAB40C-203ENST00000535977 IQCA1LA6NCM1 817 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 BST1Q10588 318 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 ZNF362Q5T0B9 420 aaPredicted RBP18.3■□□□□ 0.52
RAB40C-203ENST00000535977 UBXN11Q5T124 520 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 MPP5Q8N3R9 675 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 DNAJB3Q8WWF6 145 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 THAP1Q9NVV9 213 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 IGSF9Q9P2J2 1179 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 DCDC2Q9UHG0 476 aa18.3■□□□□ 0.52
RAB40C-203ENST00000535977 SORBS2O94875 1100 aaKnown RBP18.29■□□□□ 0.52
RAB40C-203ENST00000535977 PTPN1P18031 435 aaKnown RBP18.29■□□□□ 0.52
RAB40C-203ENST00000535977 RELAQ04206 551 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 ADIGQ0VDE8 80 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 HIC1Q14526 733 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 CHI3L2Q15782 390 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 NPLOC4Q8TAT6 608 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 WNT8BQ93098 351 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 SLC2A13Q96QE2 648 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 KLK14Q9P0G3 267 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 NCAM2O15394 837 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 HCRTO43612 131 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 CPA3P15088 417 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 FKBP1BP68106 108 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 NIPAL4Q0D2K0 466 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 STX3Q13277 289 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 BMPR2Q13873 1038 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 INSCQ1MX18 579 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 PDCD4Q53EL6 469 aaKnown RBP18.29■□□□□ 0.52
RAB40C-203ENST00000535977 CASC4Q6P4E1 433 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 SIX6OS1Q8N1H7 587 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 HIPK4Q8NE63 616 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 P2RY11Q96G91 374 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 APPL1Q9UKG1 709 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 GJD2Q9UKL4 321 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 SORCS3Q9UPU3 1222 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 CEPT1Q9Y6K0 416 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 HMX2A2RU54 273 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 GLTPD2A6NH11 291 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 HAS3O00219 553 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 RNF103O00237 685 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 UGT1A9O60656 530 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 GLRA3O75311 464 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 SNNO75324 88 aaPredicted RBP18.29■□□□□ 0.52
RAB40C-203ENST00000535977 PSEN2P49810 448 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 ZNF135P52742 658 aaPredicted RBP18.29■□□□□ 0.52
RAB40C-203ENST00000535977 CROCCP3Q8IVE0 287 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 PYROXD2Q8N2H3 581 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 GIPC3Q8TF64 312 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 UGT1A7Q9HAW7 530 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 UGT1A10Q9HAW8 530 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 UGT1A8Q9HAW9 530 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 SSX2IPQ9Y2D8 614 aa18.29■□□□□ 0.52
RAB40C-203ENST00000535977 WDR27A2RRH5 827 aa18.28■□□□□ 0.52
RAB40C-203ENST00000535977 DENRO43583 198 aaKnown RBP18.28■□□□□ 0.52
RAB40C-203ENST00000535977 RAG1P15918 1043 aa18.28■□□□□ 0.52
RAB40C-203ENST00000535977 CDH2P19022 906 aaPredicted RBP18.28■□□□□ 0.52
RAB40C-203ENST00000535977 CPOXP36551 454 aa18.28■□□□□ 0.52
RAB40C-203ENST00000535977 STT3AP46977 705 aa18.28■□□□□ 0.52
RAB40C-203ENST00000535977 HCAR3P49019 387 aa18.28■□□□□ 0.52
RAB40C-203ENST00000535977 CPT1AP50416 773 aa18.28■□□□□ 0.52
RAB40C-203ENST00000535977 SLC25A3Q00325 362 aa18.28■□□□□ 0.52
RAB40C-203ENST00000535977 TEX44Q53QW1 395 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms